Gene : Brara.A01378 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.5.1.39 - 4-hydroxybenzoate polyprenyltransferase / 4-hydroxybenzoate nonaprenyltransferase Genomic Order:  1378
Name:  ? Brara.A01378 Secondary Identifier:  ? PAC:30640385
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5871 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5872 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01378 0.5kb upstream 0.5kb upstream 3261 true A01: 7497503-7500763 Brassica rapa FPsc
Brara.A01378 0.5kb upstream 0.5kb upstream 500 false A01: 7500264-7500763 Brassica rapa FPsc
Brara.A01378 0.5kb downstream 0.5kb downstream 3261 true A01: 7497003-7500263 Brassica rapa FPsc
Brara.A01378 0.5kb downstream 0.5kb downstream 500 false A01: 7497003-7497502 Brassica rapa FPsc
Brara.A01378 1.0kb upstream 1.0kb upstream 3761 true A01: 7497503-7501263 Brassica rapa FPsc
Brara.A01378 1.0kb upstream 1.0kb upstream 1000 false A01: 7500264-7501263 Brassica rapa FPsc
Brara.A01378 1.0kb downstream 1.0kb downstream 3761 true A01: 7496503-7500263 Brassica rapa FPsc
Brara.A01378 1.0kb downstream 1.0kb downstream 1000 false A01: 7496503-7497502 Brassica rapa FPsc
Brara.A01378 2.0kb upstream 2.0kb upstream 4761 true A01: 7497503-7502263 Brassica rapa FPsc
Brara.A01378 2.0kb upstream 2.0kb upstream 2000 false A01: 7500264-7502263 Brassica rapa FPsc
Brara.A01378 2.0kb downstream 2.0kb downstream 4761 true A01: 7495503-7500263 Brassica rapa FPsc
Brara.A01378 2.0kb downstream 2.0kb downstream 2000 false A01: 7495503-7497502 Brassica rapa FPsc
Brara.A01378 5.0kb upstream 5.0kb upstream 7761 true A01: 7497503-7505263 Brassica rapa FPsc
Brara.A01378 5.0kb upstream 5.0kb upstream 5000 false A01: 7500264-7505263 Brassica rapa FPsc
Brara.A01378 5.0kb downstream 5.0kb downstream 7761 true A01: 7492503-7500263 Brassica rapa FPsc
Brara.A01378 5.0kb downstream 5.0kb downstream 5000 false A01: 7492503-7497502 Brassica rapa FPsc
Brara.A01378 10.0kb upstream 10.0kb upstream 12761 true A01: 7497503-7510263 Brassica rapa FPsc
Brara.A01378 10.0kb upstream 10.0kb upstream 10000 false A01: 7500264-7510263 Brassica rapa FPsc
Brara.A01378 10.0kb downstream 10.0kb downstream 12761 true A01: 7487503-7500263 Brassica rapa FPsc
Brara.A01378 10.0kb downstream 10.0kb downstream 10000 false A01: 7487503-7497502 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374084 5261 Brassicaceae View MSA
123828873 5264 Brassicales-Malvales View MSA
124338665 5266 SBM View MSA
124252362 5268 Malvidae View MSA
124066892 5270 Rosid View MSA
123737843 5271 Pentapetalae View MSA
122788354 5272 Eudicot View MSA
122042592 5273 Angiosperm View MSA
121344514 5274 Embryophyte View MSA
123428392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier