Gene : Brara.D00629 B. rapa FPsc v1.3
Defline:  (1 of 5) PF00954//PF01453//PF07714//PF08276//PF11883 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) // Domain of unknown function (DUF3403) (DUF3403) Genomic Order:  629
Name:  ? Brara.D00629 Secondary Identifier:  ? PAC:30622383
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00629 0.5kb upstream 0.5kb upstream 3981 true A04: 4897356-4901336 Brassica rapa FPsc
Brara.D00629 0.5kb upstream 0.5kb upstream 500 false A04: 4897356-4897855 Brassica rapa FPsc
Brara.D00629 0.5kb downstream 0.5kb downstream 3981 true A04: 4897856-4901836 Brassica rapa FPsc
Brara.D00629 0.5kb downstream 0.5kb downstream 500 false A04: 4901337-4901836 Brassica rapa FPsc
Brara.D00629 1.0kb upstream 1.0kb upstream 4481 true A04: 4896856-4901336 Brassica rapa FPsc
Brara.D00629 1.0kb upstream 1.0kb upstream 1000 false A04: 4896856-4897855 Brassica rapa FPsc
Brara.D00629 1.0kb downstream 1.0kb downstream 4481 true A04: 4897856-4902336 Brassica rapa FPsc
Brara.D00629 1.0kb downstream 1.0kb downstream 1000 false A04: 4901337-4902336 Brassica rapa FPsc
Brara.D00629 2.0kb upstream 2.0kb upstream 5481 true A04: 4895856-4901336 Brassica rapa FPsc
Brara.D00629 2.0kb upstream 2.0kb upstream 2000 false A04: 4895856-4897855 Brassica rapa FPsc
Brara.D00629 2.0kb downstream 2.0kb downstream 5481 true A04: 4897856-4903336 Brassica rapa FPsc
Brara.D00629 2.0kb downstream 2.0kb downstream 2000 false A04: 4901337-4903336 Brassica rapa FPsc
Brara.D00629 5.0kb upstream 5.0kb upstream 8481 true A04: 4892856-4901336 Brassica rapa FPsc
Brara.D00629 5.0kb upstream 5.0kb upstream 5000 false A04: 4892856-4897855 Brassica rapa FPsc
Brara.D00629 5.0kb downstream 5.0kb downstream 8481 true A04: 4897856-4906336 Brassica rapa FPsc
Brara.D00629 5.0kb downstream 5.0kb downstream 5000 false A04: 4901337-4906336 Brassica rapa FPsc
Brara.D00629 10.0kb upstream 10.0kb upstream 13481 true A04: 4887856-4901336 Brassica rapa FPsc
Brara.D00629 10.0kb upstream 10.0kb upstream 10000 false A04: 4887856-4897855 Brassica rapa FPsc
Brara.D00629 10.0kb downstream 10.0kb downstream 13481 true A04: 4897856-4911336 Brassica rapa FPsc
Brara.D00629 10.0kb downstream 10.0kb downstream 10000 false A04: 4901337-4911336 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376690 5261 Brassicaceae View MSA
123831920 5264 Brassicales-Malvales View MSA
124337022 5266 SBM View MSA
124244899 5268 Malvidae View MSA
124060833 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier