Gene : Brara.A02119 B. rapa FPsc v1.3

Defline:  (1 of 5) PTHR34058:SF1 - OXYGEN-EVOLVING ENHANCER PROTEIN 1-1, CHLOROPLASTIC-RELATED Genomic Order:  2119
Name:  ? Brara.A02119 Secondary Identifier:  ? PAC:30640237

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02119 0.5kb upstream 0.5kb upstream 2001 true A01: 12946530-12948530 Brassica rapa FPsc
Brara.A02119 0.5kb upstream 0.5kb upstream 500 false A01: 12946530-12947029 Brassica rapa FPsc
Brara.A02119 0.5kb downstream 0.5kb downstream 2001 true A01: 12947030-12949030 Brassica rapa FPsc
Brara.A02119 0.5kb downstream 0.5kb downstream 500 false A01: 12948531-12949030 Brassica rapa FPsc
Brara.A02119 1.0kb upstream 1.0kb upstream 2501 true A01: 12946030-12948530 Brassica rapa FPsc
Brara.A02119 1.0kb upstream 1.0kb upstream 1000 false A01: 12946030-12947029 Brassica rapa FPsc
Brara.A02119 1.0kb downstream 1.0kb downstream 2501 true A01: 12947030-12949530 Brassica rapa FPsc
Brara.A02119 1.0kb downstream 1.0kb downstream 1000 false A01: 12948531-12949530 Brassica rapa FPsc
Brara.A02119 2.0kb upstream 2.0kb upstream 3501 true A01: 12945030-12948530 Brassica rapa FPsc
Brara.A02119 2.0kb upstream 2.0kb upstream 2000 false A01: 12945030-12947029 Brassica rapa FPsc
Brara.A02119 2.0kb downstream 2.0kb downstream 3501 true A01: 12947030-12950530 Brassica rapa FPsc
Brara.A02119 2.0kb downstream 2.0kb downstream 2000 false A01: 12948531-12950530 Brassica rapa FPsc
Brara.A02119 5.0kb upstream 5.0kb upstream 6501 true A01: 12942030-12948530 Brassica rapa FPsc
Brara.A02119 5.0kb upstream 5.0kb upstream 5000 false A01: 12942030-12947029 Brassica rapa FPsc
Brara.A02119 5.0kb downstream 5.0kb downstream 6501 true A01: 12947030-12953530 Brassica rapa FPsc
Brara.A02119 5.0kb downstream 5.0kb downstream 5000 false A01: 12948531-12953530 Brassica rapa FPsc
Brara.A02119 10.0kb upstream 10.0kb upstream 11501 true A01: 12937030-12948530 Brassica rapa FPsc
Brara.A02119 10.0kb upstream 10.0kb upstream 10000 false A01: 12937030-12947029 Brassica rapa FPsc
Brara.A02119 10.0kb downstream 10.0kb downstream 11501 true A01: 12947030-12958530 Brassica rapa FPsc
Brara.A02119 10.0kb downstream 10.0kb downstream 10000 false A01: 12948531-12958530 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365674 5261 Brassicaceae View MSA
123840363 5264 Brassicales-Malvales View MSA
124341777 5266 SBM View MSA
124237212 5268 Malvidae View MSA
124063467 5270 Rosid View MSA
123739417 5271 Pentapetalae View MSA
122788254 5272 Eudicot View MSA
122047967 5273 Angiosperm View MSA
121344212 5274 Embryophyte View MSA
123425295 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier