Gene : Brara.A02011 B. rapa FPsc v1.3
Defline:  (1 of 6) 2.7.7.15 - Choline-phosphate cytidylyltransferase / Phosphorylcholine transferase Genomic Order:  2011
Name:  ? Brara.A02011 Secondary Identifier:  ? PAC:30636513
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY3O-450 Brassica rapa FPsc pathologic  
BrapaFPsc PWY4FS-2 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02011 0.5kb upstream 0.5kb upstream 2364 true A01: 11859827-11862190 Brassica rapa FPsc
Brara.A02011 0.5kb upstream 0.5kb upstream 500 false A01: 11861691-11862190 Brassica rapa FPsc
Brara.A02011 0.5kb downstream 0.5kb downstream 2364 true A01: 11859327-11861690 Brassica rapa FPsc
Brara.A02011 0.5kb downstream 0.5kb downstream 500 false A01: 11859327-11859826 Brassica rapa FPsc
Brara.A02011 1.0kb upstream 1.0kb upstream 2864 true A01: 11859827-11862690 Brassica rapa FPsc
Brara.A02011 1.0kb upstream 1.0kb upstream 1000 false A01: 11861691-11862690 Brassica rapa FPsc
Brara.A02011 1.0kb downstream 1.0kb downstream 2864 true A01: 11858827-11861690 Brassica rapa FPsc
Brara.A02011 1.0kb downstream 1.0kb downstream 1000 false A01: 11858827-11859826 Brassica rapa FPsc
Brara.A02011 2.0kb upstream 2.0kb upstream 3864 true A01: 11859827-11863690 Brassica rapa FPsc
Brara.A02011 2.0kb upstream 2.0kb upstream 2000 false A01: 11861691-11863690 Brassica rapa FPsc
Brara.A02011 2.0kb downstream 2.0kb downstream 3864 true A01: 11857827-11861690 Brassica rapa FPsc
Brara.A02011 2.0kb downstream 2.0kb downstream 2000 false A01: 11857827-11859826 Brassica rapa FPsc
Brara.A02011 5.0kb upstream 5.0kb upstream 6864 true A01: 11859827-11866690 Brassica rapa FPsc
Brara.A02011 5.0kb upstream 5.0kb upstream 5000 false A01: 11861691-11866690 Brassica rapa FPsc
Brara.A02011 5.0kb downstream 5.0kb downstream 6864 true A01: 11854827-11861690 Brassica rapa FPsc
Brara.A02011 5.0kb downstream 5.0kb downstream 5000 false A01: 11854827-11859826 Brassica rapa FPsc
Brara.A02011 10.0kb upstream 10.0kb upstream 11864 true A01: 11859827-11871690 Brassica rapa FPsc
Brara.A02011 10.0kb upstream 10.0kb upstream 10000 false A01: 11861691-11871690 Brassica rapa FPsc
Brara.A02011 10.0kb downstream 10.0kb downstream 11864 true A01: 11849827-11861690 Brassica rapa FPsc
Brara.A02011 10.0kb downstream 10.0kb downstream 10000 false A01: 11849827-11859826 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373110 5261 Brassicaceae View MSA
123800495 5264 Brassicales-Malvales View MSA
124297906 5266 SBM View MSA
124149683 5268 Malvidae View MSA
124069985 5270 Rosid View MSA
123749333 5271 Pentapetalae View MSA
122792398 5272 Eudicot View MSA
122047197 5273 Angiosperm View MSA
121348751 5274 Embryophyte View MSA
123428717 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier