Gene : Brara.A02051 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.13.11.53 - Acireductone dioxygenase (Ni(2+)-requiring) / E-2 Genomic Order:  2051
Name:  ? Brara.A02051 Secondary Identifier:  ? PAC:30640011
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4361 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5389 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7270 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7528 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02051 0.5kb upstream 0.5kb upstream 2218 true A01: 12267624-12269841 Brassica rapa FPsc
Brara.A02051 0.5kb upstream 0.5kb upstream 500 false A01: 12267624-12268123 Brassica rapa FPsc
Brara.A02051 0.5kb downstream 0.5kb downstream 2218 true A01: 12268124-12270341 Brassica rapa FPsc
Brara.A02051 0.5kb downstream 0.5kb downstream 500 false A01: 12269842-12270341 Brassica rapa FPsc
Brara.A02051 1.0kb upstream 1.0kb upstream 2718 true A01: 12267124-12269841 Brassica rapa FPsc
Brara.A02051 1.0kb upstream 1.0kb upstream 1000 false A01: 12267124-12268123 Brassica rapa FPsc
Brara.A02051 1.0kb downstream 1.0kb downstream 2718 true A01: 12268124-12270841 Brassica rapa FPsc
Brara.A02051 1.0kb downstream 1.0kb downstream 1000 false A01: 12269842-12270841 Brassica rapa FPsc
Brara.A02051 2.0kb upstream 2.0kb upstream 3718 true A01: 12266124-12269841 Brassica rapa FPsc
Brara.A02051 2.0kb upstream 2.0kb upstream 2000 false A01: 12266124-12268123 Brassica rapa FPsc
Brara.A02051 2.0kb downstream 2.0kb downstream 3718 true A01: 12268124-12271841 Brassica rapa FPsc
Brara.A02051 2.0kb downstream 2.0kb downstream 2000 false A01: 12269842-12271841 Brassica rapa FPsc
Brara.A02051 5.0kb upstream 5.0kb upstream 6718 true A01: 12263124-12269841 Brassica rapa FPsc
Brara.A02051 5.0kb upstream 5.0kb upstream 5000 false A01: 12263124-12268123 Brassica rapa FPsc
Brara.A02051 5.0kb downstream 5.0kb downstream 6718 true A01: 12268124-12274841 Brassica rapa FPsc
Brara.A02051 5.0kb downstream 5.0kb downstream 5000 false A01: 12269842-12274841 Brassica rapa FPsc
Brara.A02051 10.0kb upstream 10.0kb upstream 11718 true A01: 12258124-12269841 Brassica rapa FPsc
Brara.A02051 10.0kb upstream 10.0kb upstream 10000 false A01: 12258124-12268123 Brassica rapa FPsc
Brara.A02051 10.0kb downstream 10.0kb downstream 11718 true A01: 12268124-12279841 Brassica rapa FPsc
Brara.A02051 10.0kb downstream 10.0kb downstream 10000 false A01: 12269842-12279841 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378122 5261 Brassicaceae View MSA
123834658 5264 Brassicales-Malvales View MSA
124340730 5266 SBM View MSA
124241214 5268 Malvidae View MSA
124070123 5270 Rosid View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier