Gene : Brara.A02045 B. rapa FPsc v1.3

Defline:  (1 of 6) PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Genomic Order:  2045
Name:  ? Brara.A02045 Secondary Identifier:  ? PAC:30636468

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02045 0.5kb upstream 0.5kb upstream 4276 true A01: 12186963-12191238 Brassica rapa FPsc
Brara.A02045 0.5kb upstream 0.5kb upstream 500 false A01: 12186963-12187462 Brassica rapa FPsc
Brara.A02045 0.5kb downstream 0.5kb downstream 4276 true A01: 12187463-12191738 Brassica rapa FPsc
Brara.A02045 0.5kb downstream 0.5kb downstream 500 false A01: 12191239-12191738 Brassica rapa FPsc
Brara.A02045 1.0kb upstream 1.0kb upstream 4776 true A01: 12186463-12191238 Brassica rapa FPsc
Brara.A02045 1.0kb upstream 1.0kb upstream 1000 false A01: 12186463-12187462 Brassica rapa FPsc
Brara.A02045 1.0kb downstream 1.0kb downstream 4776 true A01: 12187463-12192238 Brassica rapa FPsc
Brara.A02045 1.0kb downstream 1.0kb downstream 1000 false A01: 12191239-12192238 Brassica rapa FPsc
Brara.A02045 2.0kb upstream 2.0kb upstream 5776 true A01: 12185463-12191238 Brassica rapa FPsc
Brara.A02045 2.0kb upstream 2.0kb upstream 2000 false A01: 12185463-12187462 Brassica rapa FPsc
Brara.A02045 2.0kb downstream 2.0kb downstream 5776 true A01: 12187463-12193238 Brassica rapa FPsc
Brara.A02045 2.0kb downstream 2.0kb downstream 2000 false A01: 12191239-12193238 Brassica rapa FPsc
Brara.A02045 5.0kb upstream 5.0kb upstream 8776 true A01: 12182463-12191238 Brassica rapa FPsc
Brara.A02045 5.0kb upstream 5.0kb upstream 5000 false A01: 12182463-12187462 Brassica rapa FPsc
Brara.A02045 5.0kb downstream 5.0kb downstream 8776 true A01: 12187463-12196238 Brassica rapa FPsc
Brara.A02045 5.0kb downstream 5.0kb downstream 5000 false A01: 12191239-12196238 Brassica rapa FPsc
Brara.A02045 10.0kb upstream 10.0kb upstream 13776 true A01: 12177463-12191238 Brassica rapa FPsc
Brara.A02045 10.0kb upstream 10.0kb upstream 10000 false A01: 12177463-12187462 Brassica rapa FPsc
Brara.A02045 10.0kb downstream 10.0kb downstream 13776 true A01: 12187463-12201238 Brassica rapa FPsc
Brara.A02045 10.0kb downstream 10.0kb downstream 10000 false A01: 12191239-12201238 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374995 5261 Brassicaceae View MSA
123835288 5264 Brassicales-Malvales View MSA
124340464 5266 SBM View MSA
124238771 5268 Malvidae View MSA
124060539 5270 Rosid View MSA
123746535 5271 Pentapetalae View MSA
122785782 5272 Eudicot View MSA
122047623 5273 Angiosperm View MSA
121348921 5274 Embryophyte View MSA
123381080 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier