Gene : Brara.F03253 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR24322:SF547 - ALCOHOL DEHYDROGENASE-LIKE PROTEIN Genomic Order:  3253
Name:  ? Brara.F03253 Secondary Identifier:  ? PAC:30630958
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-695 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03253 0.5kb upstream 0.5kb upstream 2064 true A06: 25541480-25543543 Brassica rapa FPsc
Brara.F03253 0.5kb upstream 0.5kb upstream 500 false A06: 25543044-25543543 Brassica rapa FPsc
Brara.F03253 0.5kb downstream 0.5kb downstream 2064 true A06: 25540980-25543043 Brassica rapa FPsc
Brara.F03253 0.5kb downstream 0.5kb downstream 500 false A06: 25540980-25541479 Brassica rapa FPsc
Brara.F03253 1.0kb upstream 1.0kb upstream 2564 true A06: 25541480-25544043 Brassica rapa FPsc
Brara.F03253 1.0kb upstream 1.0kb upstream 1000 false A06: 25543044-25544043 Brassica rapa FPsc
Brara.F03253 1.0kb downstream 1.0kb downstream 2564 true A06: 25540480-25543043 Brassica rapa FPsc
Brara.F03253 1.0kb downstream 1.0kb downstream 1000 false A06: 25540480-25541479 Brassica rapa FPsc
Brara.F03253 2.0kb upstream 2.0kb upstream 3564 true A06: 25541480-25545043 Brassica rapa FPsc
Brara.F03253 2.0kb upstream 2.0kb upstream 2000 false A06: 25543044-25545043 Brassica rapa FPsc
Brara.F03253 2.0kb downstream 2.0kb downstream 3564 true A06: 25539480-25543043 Brassica rapa FPsc
Brara.F03253 2.0kb downstream 2.0kb downstream 2000 false A06: 25539480-25541479 Brassica rapa FPsc
Brara.F03253 5.0kb upstream 5.0kb upstream 6564 true A06: 25541480-25548043 Brassica rapa FPsc
Brara.F03253 5.0kb upstream 5.0kb upstream 5000 false A06: 25543044-25548043 Brassica rapa FPsc
Brara.F03253 5.0kb downstream 5.0kb downstream 6564 true A06: 25536480-25543043 Brassica rapa FPsc
Brara.F03253 5.0kb downstream 5.0kb downstream 5000 false A06: 25536480-25541479 Brassica rapa FPsc
Brara.F03253 10.0kb upstream 10.0kb upstream 11564 true A06: 25541480-25553043 Brassica rapa FPsc
Brara.F03253 10.0kb upstream 10.0kb upstream 10000 false A06: 25543044-25553043 Brassica rapa FPsc
Brara.F03253 10.0kb downstream 10.0kb downstream 11564 true A06: 25531480-25543043 Brassica rapa FPsc
Brara.F03253 10.0kb downstream 10.0kb downstream 10000 false A06: 25531480-25541479 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369144 5261 Brassicaceae View MSA
123828735 5264 Brassicales-Malvales View MSA
124345380 5266 SBM View MSA
124247805 5268 Malvidae View MSA
124068499 5270 Rosid View MSA
123741629 5271 Pentapetalae View MSA
122790439 5272 Eudicot View MSA
122042361 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier