Gene : Brara.A01888 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR10969:SF39 - AUTOPHAGY-RELATED PROTEIN 8F Genomic Order:  1888
Name:  ? Brara.A01888 Secondary Identifier:  ? PAC:30638718
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01888 0.5kb upstream 0.5kb upstream 1420 true A01: 10831478-10832897 Brassica rapa FPsc
Brara.A01888 0.5kb upstream 0.5kb upstream 500 false A01: 10831478-10831977 Brassica rapa FPsc
Brara.A01888 0.5kb downstream 0.5kb downstream 1420 true A01: 10831978-10833397 Brassica rapa FPsc
Brara.A01888 0.5kb downstream 0.5kb downstream 500 false A01: 10832898-10833397 Brassica rapa FPsc
Brara.A01888 1.0kb upstream 1.0kb upstream 1920 true A01: 10830978-10832897 Brassica rapa FPsc
Brara.A01888 1.0kb upstream 1.0kb upstream 1000 false A01: 10830978-10831977 Brassica rapa FPsc
Brara.A01888 1.0kb downstream 1.0kb downstream 1920 true A01: 10831978-10833897 Brassica rapa FPsc
Brara.A01888 1.0kb downstream 1.0kb downstream 1000 false A01: 10832898-10833897 Brassica rapa FPsc
Brara.A01888 2.0kb upstream 2.0kb upstream 2920 true A01: 10829978-10832897 Brassica rapa FPsc
Brara.A01888 2.0kb upstream 2.0kb upstream 2000 false A01: 10829978-10831977 Brassica rapa FPsc
Brara.A01888 2.0kb downstream 2.0kb downstream 2920 true A01: 10831978-10834897 Brassica rapa FPsc
Brara.A01888 2.0kb downstream 2.0kb downstream 2000 false A01: 10832898-10834897 Brassica rapa FPsc
Brara.A01888 5.0kb upstream 5.0kb upstream 5920 true A01: 10826978-10832897 Brassica rapa FPsc
Brara.A01888 5.0kb upstream 5.0kb upstream 5000 false A01: 10826978-10831977 Brassica rapa FPsc
Brara.A01888 5.0kb downstream 5.0kb downstream 5920 true A01: 10831978-10837897 Brassica rapa FPsc
Brara.A01888 5.0kb downstream 5.0kb downstream 5000 false A01: 10832898-10837897 Brassica rapa FPsc
Brara.A01888 10.0kb upstream 10.0kb upstream 10920 true A01: 10821978-10832897 Brassica rapa FPsc
Brara.A01888 10.0kb upstream 10.0kb upstream 10000 false A01: 10821978-10831977 Brassica rapa FPsc
Brara.A01888 10.0kb downstream 10.0kb downstream 10920 true A01: 10831978-10842897 Brassica rapa FPsc
Brara.A01888 10.0kb downstream 10.0kb downstream 10000 false A01: 10832898-10842897 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352733 5261 Brassicaceae Singleton cluster - no MSA
123791423 5264 Brassicales-Malvales Singleton cluster - no MSA
124289337 5266 SBM Singleton cluster - no MSA
124255871 5268 Malvidae View MSA
124068042 5270 Rosid View MSA
123752408 5271 Pentapetalae View MSA
122791477 5272 Eudicot View MSA
122048918 5273 Angiosperm View MSA
121349541 5274 Embryophyte View MSA
123427174 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier