Gene : Brara.A01918 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10209:SF226 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN Genomic Order:  1918
Name:  ? Brara.A01918 Secondary Identifier:  ? PAC:30637348
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5125 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-641 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7267 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01918 0.5kb upstream 0.5kb upstream 1952 true A01: 11024084-11026035 Brassica rapa FPsc
Brara.A01918 0.5kb upstream 0.5kb upstream 500 false A01: 11024084-11024583 Brassica rapa FPsc
Brara.A01918 0.5kb downstream 0.5kb downstream 1952 true A01: 11024584-11026535 Brassica rapa FPsc
Brara.A01918 0.5kb downstream 0.5kb downstream 500 false A01: 11026036-11026535 Brassica rapa FPsc
Brara.A01918 1.0kb upstream 1.0kb upstream 2452 true A01: 11023584-11026035 Brassica rapa FPsc
Brara.A01918 1.0kb upstream 1.0kb upstream 1000 false A01: 11023584-11024583 Brassica rapa FPsc
Brara.A01918 1.0kb downstream 1.0kb downstream 2452 true A01: 11024584-11027035 Brassica rapa FPsc
Brara.A01918 1.0kb downstream 1.0kb downstream 1000 false A01: 11026036-11027035 Brassica rapa FPsc
Brara.A01918 2.0kb upstream 2.0kb upstream 3452 true A01: 11022584-11026035 Brassica rapa FPsc
Brara.A01918 2.0kb upstream 2.0kb upstream 2000 false A01: 11022584-11024583 Brassica rapa FPsc
Brara.A01918 2.0kb downstream 2.0kb downstream 3452 true A01: 11024584-11028035 Brassica rapa FPsc
Brara.A01918 2.0kb downstream 2.0kb downstream 2000 false A01: 11026036-11028035 Brassica rapa FPsc
Brara.A01918 5.0kb upstream 5.0kb upstream 6452 true A01: 11019584-11026035 Brassica rapa FPsc
Brara.A01918 5.0kb upstream 5.0kb upstream 5000 false A01: 11019584-11024583 Brassica rapa FPsc
Brara.A01918 5.0kb downstream 5.0kb downstream 6452 true A01: 11024584-11031035 Brassica rapa FPsc
Brara.A01918 5.0kb downstream 5.0kb downstream 5000 false A01: 11026036-11031035 Brassica rapa FPsc
Brara.A01918 10.0kb upstream 10.0kb upstream 11452 true A01: 11014584-11026035 Brassica rapa FPsc
Brara.A01918 10.0kb upstream 10.0kb upstream 10000 false A01: 11014584-11024583 Brassica rapa FPsc
Brara.A01918 10.0kb downstream 10.0kb downstream 11452 true A01: 11024584-11036035 Brassica rapa FPsc
Brara.A01918 10.0kb downstream 10.0kb downstream 10000 false A01: 11026036-11036035 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026742 5273 Angiosperm View MSA
122370796 5261 Brassicaceae View MSA
123828871 5264 Brassicales-Malvales View MSA
124341199 5266 SBM View MSA
124237151 5268 Malvidae View MSA
124062764 5270 Rosid View MSA
123736643 5271 Pentapetalae View MSA
122786747 5272 Eudicot View MSA
121347125 5274 Embryophyte View MSA
123380497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier