Gene : Brara.A01940 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10457//PTHR10457:SF12 - MEVALONATE KINASE/GALACTOKINASE Genomic Order:  1940
Name:  ? Brara.A01940 Secondary Identifier:  ? PAC:30636959
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-82 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01940 0.5kb upstream 0.5kb upstream 7519 true A01: 11189783-11197301 Brassica rapa FPsc
Brara.A01940 0.5kb upstream 0.5kb upstream 500 false A01: 11196802-11197301 Brassica rapa FPsc
Brara.A01940 0.5kb downstream 0.5kb downstream 7519 true A01: 11189283-11196801 Brassica rapa FPsc
Brara.A01940 0.5kb downstream 0.5kb downstream 500 false A01: 11189283-11189782 Brassica rapa FPsc
Brara.A01940 1.0kb upstream 1.0kb upstream 8019 true A01: 11189783-11197801 Brassica rapa FPsc
Brara.A01940 1.0kb upstream 1.0kb upstream 1000 false A01: 11196802-11197801 Brassica rapa FPsc
Brara.A01940 1.0kb downstream 1.0kb downstream 8019 true A01: 11188783-11196801 Brassica rapa FPsc
Brara.A01940 1.0kb downstream 1.0kb downstream 1000 false A01: 11188783-11189782 Brassica rapa FPsc
Brara.A01940 2.0kb upstream 2.0kb upstream 9019 true A01: 11189783-11198801 Brassica rapa FPsc
Brara.A01940 2.0kb upstream 2.0kb upstream 2000 false A01: 11196802-11198801 Brassica rapa FPsc
Brara.A01940 2.0kb downstream 2.0kb downstream 9019 true A01: 11187783-11196801 Brassica rapa FPsc
Brara.A01940 2.0kb downstream 2.0kb downstream 2000 false A01: 11187783-11189782 Brassica rapa FPsc
Brara.A01940 5.0kb upstream 5.0kb upstream 12019 true A01: 11189783-11201801 Brassica rapa FPsc
Brara.A01940 5.0kb upstream 5.0kb upstream 5000 false A01: 11196802-11201801 Brassica rapa FPsc
Brara.A01940 5.0kb downstream 5.0kb downstream 12019 true A01: 11184783-11196801 Brassica rapa FPsc
Brara.A01940 5.0kb downstream 5.0kb downstream 5000 false A01: 11184783-11189782 Brassica rapa FPsc
Brara.A01940 10.0kb upstream 10.0kb upstream 17019 true A01: 11189783-11206801 Brassica rapa FPsc
Brara.A01940 10.0kb upstream 10.0kb upstream 10000 false A01: 11196802-11206801 Brassica rapa FPsc
Brara.A01940 10.0kb downstream 10.0kb downstream 17019 true A01: 11179783-11196801 Brassica rapa FPsc
Brara.A01940 10.0kb downstream 10.0kb downstream 10000 false A01: 11179783-11189782 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370489 5261 Brassicaceae View MSA
123834106 5264 Brassicales-Malvales View MSA
124336596 5266 SBM View MSA
124242808 5268 Malvidae View MSA
124063357 5270 Rosid View MSA
123744762 5271 Pentapetalae View MSA
122790860 5272 Eudicot View MSA
122044133 5273 Angiosperm View MSA
121345310 5274 Embryophyte View MSA
123424614 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier