Gene : Brara.D00955 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR21235:SF2 - IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE HISHF Genomic Order:  955
Name:  ? Brara.D00955 Secondary Identifier:  ? PAC:30623144
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00955 0.5kb upstream 0.5kb upstream 4641 true A04: 9002700-9007340 Brassica rapa FPsc
Brara.D00955 0.5kb upstream 0.5kb upstream 500 false A04: 9002700-9003199 Brassica rapa FPsc
Brara.D00955 0.5kb downstream 0.5kb downstream 4641 true A04: 9003200-9007840 Brassica rapa FPsc
Brara.D00955 0.5kb downstream 0.5kb downstream 500 false A04: 9007341-9007840 Brassica rapa FPsc
Brara.D00955 1.0kb upstream 1.0kb upstream 5141 true A04: 9002200-9007340 Brassica rapa FPsc
Brara.D00955 1.0kb upstream 1.0kb upstream 1000 false A04: 9002200-9003199 Brassica rapa FPsc
Brara.D00955 1.0kb downstream 1.0kb downstream 5141 true A04: 9003200-9008340 Brassica rapa FPsc
Brara.D00955 1.0kb downstream 1.0kb downstream 1000 false A04: 9007341-9008340 Brassica rapa FPsc
Brara.D00955 2.0kb upstream 2.0kb upstream 6141 true A04: 9001200-9007340 Brassica rapa FPsc
Brara.D00955 2.0kb upstream 2.0kb upstream 2000 false A04: 9001200-9003199 Brassica rapa FPsc
Brara.D00955 2.0kb downstream 2.0kb downstream 6141 true A04: 9003200-9009340 Brassica rapa FPsc
Brara.D00955 2.0kb downstream 2.0kb downstream 2000 false A04: 9007341-9009340 Brassica rapa FPsc
Brara.D00955 5.0kb upstream 5.0kb upstream 9141 true A04: 8998200-9007340 Brassica rapa FPsc
Brara.D00955 5.0kb upstream 5.0kb upstream 5000 false A04: 8998200-9003199 Brassica rapa FPsc
Brara.D00955 5.0kb downstream 5.0kb downstream 9141 true A04: 9003200-9012340 Brassica rapa FPsc
Brara.D00955 5.0kb downstream 5.0kb downstream 5000 false A04: 9007341-9012340 Brassica rapa FPsc
Brara.D00955 10.0kb upstream 10.0kb upstream 14141 true A04: 8993200-9007340 Brassica rapa FPsc
Brara.D00955 10.0kb upstream 10.0kb upstream 10000 false A04: 8993200-9003199 Brassica rapa FPsc
Brara.D00955 10.0kb downstream 10.0kb downstream 14141 true A04: 9003200-9017340 Brassica rapa FPsc
Brara.D00955 10.0kb downstream 10.0kb downstream 10000 false A04: 9007341-9017340 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349037 5261 Brassicaceae Singleton cluster - no MSA
123788284 5264 Brassicales-Malvales Singleton cluster - no MSA
124286320 5266 SBM Singleton cluster - no MSA
124140213 5268 Malvidae Singleton cluster - no MSA
123867475 5270 Rosid Singleton cluster - no MSA
123743623 5271 Pentapetalae View MSA
122792259 5272 Eudicot View MSA
122046043 5273 Angiosperm View MSA
121347063 5274 Embryophyte View MSA
123424776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier