Gene : Brara.F02962 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR12418:SF33 - 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 Genomic Order:  2962
Name:  ? Brara.F02962 Secondary Identifier:  ? PAC:30628423
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5837 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02962 0.5kb upstream 0.5kb upstream 1731 true A06: 23913035-23914765 Brassica rapa FPsc
Brara.F02962 0.5kb upstream 0.5kb upstream 500 false A06: 23914266-23914765 Brassica rapa FPsc
Brara.F02962 0.5kb downstream 0.5kb downstream 1731 true A06: 23912535-23914265 Brassica rapa FPsc
Brara.F02962 0.5kb downstream 0.5kb downstream 500 false A06: 23912535-23913034 Brassica rapa FPsc
Brara.F02962 1.0kb upstream 1.0kb upstream 2231 true A06: 23913035-23915265 Brassica rapa FPsc
Brara.F02962 1.0kb upstream 1.0kb upstream 1000 false A06: 23914266-23915265 Brassica rapa FPsc
Brara.F02962 1.0kb downstream 1.0kb downstream 2231 true A06: 23912035-23914265 Brassica rapa FPsc
Brara.F02962 1.0kb downstream 1.0kb downstream 1000 false A06: 23912035-23913034 Brassica rapa FPsc
Brara.F02962 2.0kb upstream 2.0kb upstream 3231 true A06: 23913035-23916265 Brassica rapa FPsc
Brara.F02962 2.0kb upstream 2.0kb upstream 2000 false A06: 23914266-23916265 Brassica rapa FPsc
Brara.F02962 2.0kb downstream 2.0kb downstream 3231 true A06: 23911035-23914265 Brassica rapa FPsc
Brara.F02962 2.0kb downstream 2.0kb downstream 2000 false A06: 23911035-23913034 Brassica rapa FPsc
Brara.F02962 5.0kb upstream 5.0kb upstream 6231 true A06: 23913035-23919265 Brassica rapa FPsc
Brara.F02962 5.0kb upstream 5.0kb upstream 5000 false A06: 23914266-23919265 Brassica rapa FPsc
Brara.F02962 5.0kb downstream 5.0kb downstream 6231 true A06: 23908035-23914265 Brassica rapa FPsc
Brara.F02962 5.0kb downstream 5.0kb downstream 5000 false A06: 23908035-23913034 Brassica rapa FPsc
Brara.F02962 10.0kb upstream 10.0kb upstream 11231 true A06: 23913035-23924265 Brassica rapa FPsc
Brara.F02962 10.0kb upstream 10.0kb upstream 10000 false A06: 23914266-23924265 Brassica rapa FPsc
Brara.F02962 10.0kb downstream 10.0kb downstream 11231 true A06: 23903035-23914265 Brassica rapa FPsc
Brara.F02962 10.0kb downstream 10.0kb downstream 10000 false A06: 23903035-23913034 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369966 5261 Brassicaceae View MSA
123799873 5264 Brassicales-Malvales View MSA
124297353 5266 SBM View MSA
124149272 5268 Malvidae View MSA
124067278 5270 Rosid View MSA
123738374 5271 Pentapetalae View MSA
122791322 5272 Eudicot View MSA
122042191 5273 Angiosperm View MSA
121348407 5274 Embryophyte View MSA
123380851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier