Gene : Brara.A01859 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10909:SF250 - PEROXISOMAL ACYL-COENZYME A OXIDASE 2 Genomic Order:  1859
Name:  ? Brara.A01859 Secondary Identifier:  ? PAC:30639390
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6837 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-735 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7606 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01859 0.5kb upstream 0.5kb upstream 4472 true A01: 10587342-10591813 Brassica rapa FPsc
Brara.A01859 0.5kb upstream 0.5kb upstream 500 false A01: 10587342-10587841 Brassica rapa FPsc
Brara.A01859 0.5kb downstream 0.5kb downstream 4472 true A01: 10587842-10592313 Brassica rapa FPsc
Brara.A01859 0.5kb downstream 0.5kb downstream 500 false A01: 10591814-10592313 Brassica rapa FPsc
Brara.A01859 1.0kb upstream 1.0kb upstream 4972 true A01: 10586842-10591813 Brassica rapa FPsc
Brara.A01859 1.0kb upstream 1.0kb upstream 1000 false A01: 10586842-10587841 Brassica rapa FPsc
Brara.A01859 1.0kb downstream 1.0kb downstream 4972 true A01: 10587842-10592813 Brassica rapa FPsc
Brara.A01859 1.0kb downstream 1.0kb downstream 1000 false A01: 10591814-10592813 Brassica rapa FPsc
Brara.A01859 2.0kb upstream 2.0kb upstream 5972 true A01: 10585842-10591813 Brassica rapa FPsc
Brara.A01859 2.0kb upstream 2.0kb upstream 2000 false A01: 10585842-10587841 Brassica rapa FPsc
Brara.A01859 2.0kb downstream 2.0kb downstream 5972 true A01: 10587842-10593813 Brassica rapa FPsc
Brara.A01859 2.0kb downstream 2.0kb downstream 2000 false A01: 10591814-10593813 Brassica rapa FPsc
Brara.A01859 5.0kb upstream 5.0kb upstream 8972 true A01: 10582842-10591813 Brassica rapa FPsc
Brara.A01859 5.0kb upstream 5.0kb upstream 5000 false A01: 10582842-10587841 Brassica rapa FPsc
Brara.A01859 5.0kb downstream 5.0kb downstream 8972 true A01: 10587842-10596813 Brassica rapa FPsc
Brara.A01859 5.0kb downstream 5.0kb downstream 5000 false A01: 10591814-10596813 Brassica rapa FPsc
Brara.A01859 10.0kb upstream 10.0kb upstream 13972 true A01: 10577842-10591813 Brassica rapa FPsc
Brara.A01859 10.0kb upstream 10.0kb upstream 10000 false A01: 10577842-10587841 Brassica rapa FPsc
Brara.A01859 10.0kb downstream 10.0kb downstream 13972 true A01: 10587842-10601813 Brassica rapa FPsc
Brara.A01859 10.0kb downstream 10.0kb downstream 10000 false A01: 10591814-10601813 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370678 5261 Brassicaceae View MSA
123837272 5264 Brassicales-Malvales View MSA
124342369 5266 SBM View MSA
124238723 5268 Malvidae View MSA
124065660 5270 Rosid View MSA
123739070 5271 Pentapetalae View MSA
122787917 5272 Eudicot View MSA
122045798 5273 Angiosperm View MSA
121345655 5274 Embryophyte View MSA
123428216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier