Gene : Brara.F02821 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR31321:SF32 - PECTINESTERASE 52-RELATED Genomic Order:  2821
Name:  ? Brara.F02821 Secondary Identifier:  ? PAC:30631503
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02821 0.5kb upstream 0.5kb upstream 2304 true A06: 23058751-23061054 Brassica rapa FPsc
Brara.F02821 0.5kb upstream 0.5kb upstream 500 false A06: 23058751-23059250 Brassica rapa FPsc
Brara.F02821 0.5kb downstream 0.5kb downstream 2304 true A06: 23059251-23061554 Brassica rapa FPsc
Brara.F02821 0.5kb downstream 0.5kb downstream 500 false A06: 23061055-23061554 Brassica rapa FPsc
Brara.F02821 1.0kb upstream 1.0kb upstream 2804 true A06: 23058251-23061054 Brassica rapa FPsc
Brara.F02821 1.0kb upstream 1.0kb upstream 1000 false A06: 23058251-23059250 Brassica rapa FPsc
Brara.F02821 1.0kb downstream 1.0kb downstream 2804 true A06: 23059251-23062054 Brassica rapa FPsc
Brara.F02821 1.0kb downstream 1.0kb downstream 1000 false A06: 23061055-23062054 Brassica rapa FPsc
Brara.F02821 2.0kb upstream 2.0kb upstream 3804 true A06: 23057251-23061054 Brassica rapa FPsc
Brara.F02821 2.0kb upstream 2.0kb upstream 2000 false A06: 23057251-23059250 Brassica rapa FPsc
Brara.F02821 2.0kb downstream 2.0kb downstream 3804 true A06: 23059251-23063054 Brassica rapa FPsc
Brara.F02821 2.0kb downstream 2.0kb downstream 2000 false A06: 23061055-23063054 Brassica rapa FPsc
Brara.F02821 5.0kb upstream 5.0kb upstream 6804 true A06: 23054251-23061054 Brassica rapa FPsc
Brara.F02821 5.0kb upstream 5.0kb upstream 5000 false A06: 23054251-23059250 Brassica rapa FPsc
Brara.F02821 5.0kb downstream 5.0kb downstream 6804 true A06: 23059251-23066054 Brassica rapa FPsc
Brara.F02821 5.0kb downstream 5.0kb downstream 5000 false A06: 23061055-23066054 Brassica rapa FPsc
Brara.F02821 10.0kb upstream 10.0kb upstream 11804 true A06: 23049251-23061054 Brassica rapa FPsc
Brara.F02821 10.0kb upstream 10.0kb upstream 10000 false A06: 23049251-23059250 Brassica rapa FPsc
Brara.F02821 10.0kb downstream 10.0kb downstream 11804 true A06: 23059251-23071054 Brassica rapa FPsc
Brara.F02821 10.0kb downstream 10.0kb downstream 10000 false A06: 23061055-23071054 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381761 5261 Brassicaceae View MSA
123837019 5264 Brassicales-Malvales View MSA
124347983 5266 SBM View MSA
124248837 5268 Malvidae View MSA
124064773 5270 Rosid View MSA
123747897 5271 Pentapetalae View MSA
122796523 5272 Eudicot View MSA
122051382 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier