Gene : Brara.A02509 B. rapa FPsc v1.3
Defline:  (1 of 1) KOG2770 - Aminomethyl transferase Genomic Order:  2509
Name:  ? Brara.A02509 Secondary Identifier:  ? PAC:30640268
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLYCLEAV-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02509 0.5kb upstream 0.5kb upstream 2996 true A01: 20456554-20459549 Brassica rapa FPsc
Brara.A02509 0.5kb upstream 0.5kb upstream 500 false A01: 20459050-20459549 Brassica rapa FPsc
Brara.A02509 0.5kb downstream 0.5kb downstream 2996 true A01: 20456054-20459049 Brassica rapa FPsc
Brara.A02509 0.5kb downstream 0.5kb downstream 500 false A01: 20456054-20456553 Brassica rapa FPsc
Brara.A02509 1.0kb upstream 1.0kb upstream 3496 true A01: 20456554-20460049 Brassica rapa FPsc
Brara.A02509 1.0kb upstream 1.0kb upstream 1000 false A01: 20459050-20460049 Brassica rapa FPsc
Brara.A02509 1.0kb downstream 1.0kb downstream 3496 true A01: 20455554-20459049 Brassica rapa FPsc
Brara.A02509 1.0kb downstream 1.0kb downstream 1000 false A01: 20455554-20456553 Brassica rapa FPsc
Brara.A02509 2.0kb upstream 2.0kb upstream 4496 true A01: 20456554-20461049 Brassica rapa FPsc
Brara.A02509 2.0kb upstream 2.0kb upstream 2000 false A01: 20459050-20461049 Brassica rapa FPsc
Brara.A02509 2.0kb downstream 2.0kb downstream 4496 true A01: 20454554-20459049 Brassica rapa FPsc
Brara.A02509 2.0kb downstream 2.0kb downstream 2000 false A01: 20454554-20456553 Brassica rapa FPsc
Brara.A02509 5.0kb upstream 5.0kb upstream 7496 true A01: 20456554-20464049 Brassica rapa FPsc
Brara.A02509 5.0kb upstream 5.0kb upstream 5000 false A01: 20459050-20464049 Brassica rapa FPsc
Brara.A02509 5.0kb downstream 5.0kb downstream 7496 true A01: 20451554-20459049 Brassica rapa FPsc
Brara.A02509 5.0kb downstream 5.0kb downstream 5000 false A01: 20451554-20456553 Brassica rapa FPsc
Brara.A02509 10.0kb upstream 10.0kb upstream 12496 true A01: 20456554-20469049 Brassica rapa FPsc
Brara.A02509 10.0kb upstream 10.0kb upstream 10000 false A01: 20459050-20469049 Brassica rapa FPsc
Brara.A02509 10.0kb downstream 10.0kb downstream 12496 true A01: 20446554-20459049 Brassica rapa FPsc
Brara.A02509 10.0kb downstream 10.0kb downstream 10000 false A01: 20446554-20456553 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367907 5261 Brassicaceae View MSA
123829010 5264 Brassicales-Malvales View MSA
124339794 5266 SBM View MSA
124244031 5268 Malvidae View MSA
124066911 5270 Rosid View MSA
123736787 5271 Pentapetalae View MSA
122786852 5272 Eudicot View MSA
122044348 5273 Angiosperm View MSA
121345133 5274 Embryophyte View MSA
123423881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier