Gene : Brara.G00430 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR22572:SF101 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE SMALL SUBUNIT, CHLOROPLASTIC Genomic Order:  430
Name:  ? Brara.G00430 Secondary Identifier:  ? PAC:30634424
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLYCOGENSYNTH-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-622 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00430 0.5kb upstream 0.5kb upstream 3036 true A07: 5097273-5100308 Brassica rapa FPsc
Brara.G00430 0.5kb upstream 0.5kb upstream 500 false A07: 5099809-5100308 Brassica rapa FPsc
Brara.G00430 0.5kb downstream 0.5kb downstream 3036 true A07: 5096773-5099808 Brassica rapa FPsc
Brara.G00430 0.5kb downstream 0.5kb downstream 500 false A07: 5096773-5097272 Brassica rapa FPsc
Brara.G00430 1.0kb upstream 1.0kb upstream 3536 true A07: 5097273-5100808 Brassica rapa FPsc
Brara.G00430 1.0kb upstream 1.0kb upstream 1000 false A07: 5099809-5100808 Brassica rapa FPsc
Brara.G00430 1.0kb downstream 1.0kb downstream 3536 true A07: 5096273-5099808 Brassica rapa FPsc
Brara.G00430 1.0kb downstream 1.0kb downstream 1000 false A07: 5096273-5097272 Brassica rapa FPsc
Brara.G00430 2.0kb upstream 2.0kb upstream 4536 true A07: 5097273-5101808 Brassica rapa FPsc
Brara.G00430 2.0kb upstream 2.0kb upstream 2000 false A07: 5099809-5101808 Brassica rapa FPsc
Brara.G00430 2.0kb downstream 2.0kb downstream 4536 true A07: 5095273-5099808 Brassica rapa FPsc
Brara.G00430 2.0kb downstream 2.0kb downstream 2000 false A07: 5095273-5097272 Brassica rapa FPsc
Brara.G00430 5.0kb upstream 5.0kb upstream 7536 true A07: 5097273-5104808 Brassica rapa FPsc
Brara.G00430 5.0kb upstream 5.0kb upstream 5000 false A07: 5099809-5104808 Brassica rapa FPsc
Brara.G00430 5.0kb downstream 5.0kb downstream 7536 true A07: 5092273-5099808 Brassica rapa FPsc
Brara.G00430 5.0kb downstream 5.0kb downstream 5000 false A07: 5092273-5097272 Brassica rapa FPsc
Brara.G00430 10.0kb upstream 10.0kb upstream 12536 true A07: 5097273-5109808 Brassica rapa FPsc
Brara.G00430 10.0kb upstream 10.0kb upstream 10000 false A07: 5099809-5109808 Brassica rapa FPsc
Brara.G00430 10.0kb downstream 10.0kb downstream 12536 true A07: 5087273-5099808 Brassica rapa FPsc
Brara.G00430 10.0kb downstream 10.0kb downstream 10000 false A07: 5087273-5097272 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365364 5261 Brassicaceae View MSA
123836919 5264 Brassicales-Malvales View MSA
124346329 5266 SBM View MSA
124239749 5268 Malvidae View MSA
124067564 5270 Rosid View MSA
123737587 5271 Pentapetalae View MSA
122787627 5272 Eudicot View MSA
122044250 5273 Angiosperm View MSA
121350002 5274 Embryophyte View MSA
123424956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier