Gene : Brara.G00209 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR31388:SF16 - PEROXIDASE 14-RELATED Genomic Order:  209
Name:  ? Brara.G00209 Secondary Identifier:  ? PAC:30633942
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5466 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7214 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7445 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00209 0.5kb upstream 0.5kb upstream 1975 true A07: 1915547-1917521 Brassica rapa FPsc
Brara.G00209 0.5kb upstream 0.5kb upstream 500 false A07: 1915547-1916046 Brassica rapa FPsc
Brara.G00209 0.5kb downstream 0.5kb downstream 1975 true A07: 1916047-1918021 Brassica rapa FPsc
Brara.G00209 0.5kb downstream 0.5kb downstream 500 false A07: 1917522-1918021 Brassica rapa FPsc
Brara.G00209 1.0kb upstream 1.0kb upstream 2475 true A07: 1915047-1917521 Brassica rapa FPsc
Brara.G00209 1.0kb upstream 1.0kb upstream 1000 false A07: 1915047-1916046 Brassica rapa FPsc
Brara.G00209 1.0kb downstream 1.0kb downstream 2475 true A07: 1916047-1918521 Brassica rapa FPsc
Brara.G00209 1.0kb downstream 1.0kb downstream 1000 false A07: 1917522-1918521 Brassica rapa FPsc
Brara.G00209 2.0kb upstream 2.0kb upstream 3475 true A07: 1914047-1917521 Brassica rapa FPsc
Brara.G00209 2.0kb upstream 2.0kb upstream 2000 false A07: 1914047-1916046 Brassica rapa FPsc
Brara.G00209 2.0kb downstream 2.0kb downstream 3475 true A07: 1916047-1919521 Brassica rapa FPsc
Brara.G00209 2.0kb downstream 2.0kb downstream 2000 false A07: 1917522-1919521 Brassica rapa FPsc
Brara.G00209 5.0kb upstream 5.0kb upstream 6475 true A07: 1911047-1917521 Brassica rapa FPsc
Brara.G00209 5.0kb upstream 5.0kb upstream 5000 false A07: 1911047-1916046 Brassica rapa FPsc
Brara.G00209 5.0kb downstream 5.0kb downstream 6475 true A07: 1916047-1922521 Brassica rapa FPsc
Brara.G00209 5.0kb downstream 5.0kb downstream 5000 false A07: 1917522-1922521 Brassica rapa FPsc
Brara.G00209 10.0kb upstream 10.0kb upstream 11475 true A07: 1906047-1917521 Brassica rapa FPsc
Brara.G00209 10.0kb upstream 10.0kb upstream 10000 false A07: 1906047-1916046 Brassica rapa FPsc
Brara.G00209 10.0kb downstream 10.0kb downstream 11475 true A07: 1916047-1927521 Brassica rapa FPsc
Brara.G00209 10.0kb downstream 10.0kb downstream 10000 false A07: 1917522-1927521 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371157 5261 Brassicaceae View MSA
123841909 5264 Brassicales-Malvales View MSA
124350958 5266 SBM View MSA
124252962 5268 Malvidae View MSA
124074247 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier