Gene : Brara.G00043 B. rapa FPsc v1.3
Defline:  (1 of 6) 4.1.1.25 - Tyrosine decarboxylase / L-tyrosine carboxy-lyase Genomic Order:  43
Name:  ? Brara.G00043 Secondary Identifier:  ? PAC:30634022
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6802 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00043 0.5kb upstream 0.5kb upstream 3261 true A07: 274549-277809 Brassica rapa FPsc
Brara.G00043 0.5kb upstream 0.5kb upstream 500 false A07: 277310-277809 Brassica rapa FPsc
Brara.G00043 0.5kb downstream 0.5kb downstream 3261 true A07: 274049-277309 Brassica rapa FPsc
Brara.G00043 0.5kb downstream 0.5kb downstream 500 false A07: 274049-274548 Brassica rapa FPsc
Brara.G00043 1.0kb upstream 1.0kb upstream 3761 true A07: 274549-278309 Brassica rapa FPsc
Brara.G00043 1.0kb upstream 1.0kb upstream 1000 false A07: 277310-278309 Brassica rapa FPsc
Brara.G00043 1.0kb downstream 1.0kb downstream 3761 true A07: 273549-277309 Brassica rapa FPsc
Brara.G00043 1.0kb downstream 1.0kb downstream 1000 false A07: 273549-274548 Brassica rapa FPsc
Brara.G00043 2.0kb upstream 2.0kb upstream 4761 true A07: 274549-279309 Brassica rapa FPsc
Brara.G00043 2.0kb upstream 2.0kb upstream 2000 false A07: 277310-279309 Brassica rapa FPsc
Brara.G00043 2.0kb downstream 2.0kb downstream 4761 true A07: 272549-277309 Brassica rapa FPsc
Brara.G00043 2.0kb downstream 2.0kb downstream 2000 false A07: 272549-274548 Brassica rapa FPsc
Brara.G00043 5.0kb upstream 5.0kb upstream 7761 true A07: 274549-282309 Brassica rapa FPsc
Brara.G00043 5.0kb upstream 5.0kb upstream 5000 false A07: 277310-282309 Brassica rapa FPsc
Brara.G00043 5.0kb downstream 5.0kb downstream 7761 true A07: 269549-277309 Brassica rapa FPsc
Brara.G00043 5.0kb downstream 5.0kb downstream 5000 false A07: 269549-274548 Brassica rapa FPsc
Brara.G00043 10.0kb upstream 10.0kb upstream 12761 true A07: 274549-287309 Brassica rapa FPsc
Brara.G00043 10.0kb upstream 10.0kb upstream 10000 false A07: 277310-287309 Brassica rapa FPsc
Brara.G00043 10.0kb downstream 10.0kb downstream 12761 true A07: 264549-277309 Brassica rapa FPsc
Brara.G00043 10.0kb downstream 10.0kb downstream 10000 false A07: 264549-274548 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351569 5261 Brassicaceae Singleton cluster - no MSA
123841005 5264 Brassicales-Malvales View MSA
124341359 5266 SBM View MSA
124240845 5268 Malvidae View MSA
124063547 5270 Rosid View MSA
123753365 5271 Pentapetalae View MSA
122794689 5272 Eudicot View MSA
122049990 5273 Angiosperm View MSA
121346874 5274 Embryophyte View MSA
123423954 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier