Gene : Brara.F03831 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR21493//PTHR21493:SF104 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN Genomic Order:  3831
Name:  ? Brara.F03831 Secondary Identifier:  ? PAC:30628985
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPAS-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03831 0.5kb upstream 0.5kb upstream 5557 true A06: 28821747-28827303 Brassica rapa FPsc
Brara.F03831 0.5kb upstream 0.5kb upstream 500 false A06: 28821747-28822246 Brassica rapa FPsc
Brara.F03831 0.5kb downstream 0.5kb downstream 5557 true A06: 28822247-28827803 Brassica rapa FPsc
Brara.F03831 0.5kb downstream 0.5kb downstream 500 false A06: 28827304-28827803 Brassica rapa FPsc
Brara.F03831 1.0kb upstream 1.0kb upstream 6057 true A06: 28821247-28827303 Brassica rapa FPsc
Brara.F03831 1.0kb upstream 1.0kb upstream 1000 false A06: 28821247-28822246 Brassica rapa FPsc
Brara.F03831 1.0kb downstream 1.0kb downstream 6057 true A06: 28822247-28828303 Brassica rapa FPsc
Brara.F03831 1.0kb downstream 1.0kb downstream 1000 false A06: 28827304-28828303 Brassica rapa FPsc
Brara.F03831 2.0kb upstream 2.0kb upstream 7057 true A06: 28820247-28827303 Brassica rapa FPsc
Brara.F03831 2.0kb upstream 2.0kb upstream 2000 false A06: 28820247-28822246 Brassica rapa FPsc
Brara.F03831 2.0kb downstream 2.0kb downstream 7057 true A06: 28822247-28829303 Brassica rapa FPsc
Brara.F03831 2.0kb downstream 2.0kb downstream 2000 false A06: 28827304-28829303 Brassica rapa FPsc
Brara.F03831 5.0kb upstream 5.0kb upstream 10057 true A06: 28817247-28827303 Brassica rapa FPsc
Brara.F03831 5.0kb upstream 5.0kb upstream 5000 false A06: 28817247-28822246 Brassica rapa FPsc
Brara.F03831 5.0kb downstream 5.0kb downstream 10057 true A06: 28822247-28832303 Brassica rapa FPsc
Brara.F03831 5.0kb downstream 5.0kb downstream 5000 false A06: 28827304-28832303 Brassica rapa FPsc
Brara.F03831 10.0kb upstream 10.0kb upstream 15057 true A06: 28812247-28827303 Brassica rapa FPsc
Brara.F03831 10.0kb upstream 10.0kb upstream 10000 false A06: 28812247-28822246 Brassica rapa FPsc
Brara.F03831 10.0kb downstream 10.0kb downstream 15057 true A06: 28822247-28837303 Brassica rapa FPsc
Brara.F03831 10.0kb downstream 10.0kb downstream 10000 false A06: 28827304-28837303 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369389 5261 Brassicaceae View MSA
123828194 5264 Brassicales-Malvales View MSA
124345442 5266 SBM View MSA
124242936 5268 Malvidae View MSA
124069453 5270 Rosid View MSA
123746073 5271 Pentapetalae View MSA
122791572 5272 Eudicot View MSA
122051132 5273 Angiosperm View MSA
121349994 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier