Gene : Brara.D01194 B. rapa FPsc v1.3
Defline:  (1 of 8) PTHR22849:SF43 - U-BOX DOMAIN-CONTAINING PROTEIN 54-RELATED Genomic Order:  1194
Name:  ? Brara.D01194 Secondary Identifier:  ? PAC:30622814
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01194 0.5kb upstream 0.5kb upstream 1816 true A04: 10985104-10986919 Brassica rapa FPsc
Brara.D01194 0.5kb upstream 0.5kb upstream 500 false A04: 10986420-10986919 Brassica rapa FPsc
Brara.D01194 0.5kb downstream 0.5kb downstream 1816 true A04: 10984604-10986419 Brassica rapa FPsc
Brara.D01194 0.5kb downstream 0.5kb downstream 500 false A04: 10984604-10985103 Brassica rapa FPsc
Brara.D01194 1.0kb upstream 1.0kb upstream 2316 true A04: 10985104-10987419 Brassica rapa FPsc
Brara.D01194 1.0kb upstream 1.0kb upstream 1000 false A04: 10986420-10987419 Brassica rapa FPsc
Brara.D01194 1.0kb downstream 1.0kb downstream 2316 true A04: 10984104-10986419 Brassica rapa FPsc
Brara.D01194 1.0kb downstream 1.0kb downstream 1000 false A04: 10984104-10985103 Brassica rapa FPsc
Brara.D01194 2.0kb upstream 2.0kb upstream 3316 true A04: 10985104-10988419 Brassica rapa FPsc
Brara.D01194 2.0kb upstream 2.0kb upstream 2000 false A04: 10986420-10988419 Brassica rapa FPsc
Brara.D01194 2.0kb downstream 2.0kb downstream 3316 true A04: 10983104-10986419 Brassica rapa FPsc
Brara.D01194 2.0kb downstream 2.0kb downstream 2000 false A04: 10983104-10985103 Brassica rapa FPsc
Brara.D01194 5.0kb upstream 5.0kb upstream 6316 true A04: 10985104-10991419 Brassica rapa FPsc
Brara.D01194 5.0kb upstream 5.0kb upstream 5000 false A04: 10986420-10991419 Brassica rapa FPsc
Brara.D01194 5.0kb downstream 5.0kb downstream 6316 true A04: 10980104-10986419 Brassica rapa FPsc
Brara.D01194 5.0kb downstream 5.0kb downstream 5000 false A04: 10980104-10985103 Brassica rapa FPsc
Brara.D01194 10.0kb upstream 10.0kb upstream 11316 true A04: 10985104-10996419 Brassica rapa FPsc
Brara.D01194 10.0kb upstream 10.0kb upstream 10000 false A04: 10986420-10996419 Brassica rapa FPsc
Brara.D01194 10.0kb downstream 10.0kb downstream 11316 true A04: 10975104-10986419 Brassica rapa FPsc
Brara.D01194 10.0kb downstream 10.0kb downstream 10000 false A04: 10975104-10985103 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374127 5261 Brassicaceae View MSA
123838287 5264 Brassicales-Malvales View MSA
124342273 5266 SBM View MSA
124246000 5268 Malvidae View MSA
124062447 5270 Rosid View MSA
123744256 5271 Pentapetalae View MSA
122789600 5272 Eudicot View MSA
122042359 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier