Gene : Brara.G01347 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Genomic Order:  1347
Name:  ? Brara.G01347 Secondary Identifier:  ? PAC:30634576
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5980 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01347 0.5kb upstream 0.5kb upstream 2458 true A07: 13993882-13996339 Brassica rapa FPsc
Brara.G01347 0.5kb upstream 0.5kb upstream 500 false A07: 13995840-13996339 Brassica rapa FPsc
Brara.G01347 0.5kb downstream 0.5kb downstream 2458 true A07: 13993382-13995839 Brassica rapa FPsc
Brara.G01347 0.5kb downstream 0.5kb downstream 500 false A07: 13993382-13993881 Brassica rapa FPsc
Brara.G01347 1.0kb upstream 1.0kb upstream 2958 true A07: 13993882-13996839 Brassica rapa FPsc
Brara.G01347 1.0kb upstream 1.0kb upstream 1000 false A07: 13995840-13996839 Brassica rapa FPsc
Brara.G01347 1.0kb downstream 1.0kb downstream 2958 true A07: 13992882-13995839 Brassica rapa FPsc
Brara.G01347 1.0kb downstream 1.0kb downstream 1000 false A07: 13992882-13993881 Brassica rapa FPsc
Brara.G01347 2.0kb upstream 2.0kb upstream 3958 true A07: 13993882-13997839 Brassica rapa FPsc
Brara.G01347 2.0kb upstream 2.0kb upstream 2000 false A07: 13995840-13997839 Brassica rapa FPsc
Brara.G01347 2.0kb downstream 2.0kb downstream 3958 true A07: 13991882-13995839 Brassica rapa FPsc
Brara.G01347 2.0kb downstream 2.0kb downstream 2000 false A07: 13991882-13993881 Brassica rapa FPsc
Brara.G01347 5.0kb upstream 5.0kb upstream 6958 true A07: 13993882-14000839 Brassica rapa FPsc
Brara.G01347 5.0kb upstream 5.0kb upstream 5000 false A07: 13995840-14000839 Brassica rapa FPsc
Brara.G01347 5.0kb downstream 5.0kb downstream 6958 true A07: 13988882-13995839 Brassica rapa FPsc
Brara.G01347 5.0kb downstream 5.0kb downstream 5000 false A07: 13988882-13993881 Brassica rapa FPsc
Brara.G01347 10.0kb upstream 10.0kb upstream 11958 true A07: 13993882-14005839 Brassica rapa FPsc
Brara.G01347 10.0kb upstream 10.0kb upstream 10000 false A07: 13995840-14005839 Brassica rapa FPsc
Brara.G01347 10.0kb downstream 10.0kb downstream 11958 true A07: 13983882-13995839 Brassica rapa FPsc
Brara.G01347 10.0kb downstream 10.0kb downstream 10000 false A07: 13983882-13993881 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377762 5261 Brassicaceae View MSA
123836741 5264 Brassicales-Malvales View MSA
124339528 5266 SBM View MSA
124254055 5268 Malvidae View MSA
124063526 5270 Rosid View MSA
123741698 5271 Pentapetalae View MSA
122788923 5272 Eudicot View MSA
122042963 5273 Angiosperm View MSA
121350379 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier