Gene : Brara.G01378 B. rapa FPsc v1.3
Defline:  (1 of 1) 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Genomic Order:  1378
Name:  ? Brara.G01378 Secondary Identifier:  ? PAC:30635655
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01378 0.5kb upstream 0.5kb upstream 4273 true A07: 14221038-14225310 Brassica rapa FPsc
Brara.G01378 0.5kb upstream 0.5kb upstream 500 false A07: 14224811-14225310 Brassica rapa FPsc
Brara.G01378 0.5kb downstream 0.5kb downstream 4273 true A07: 14220538-14224810 Brassica rapa FPsc
Brara.G01378 0.5kb downstream 0.5kb downstream 500 false A07: 14220538-14221037 Brassica rapa FPsc
Brara.G01378 1.0kb upstream 1.0kb upstream 4773 true A07: 14221038-14225810 Brassica rapa FPsc
Brara.G01378 1.0kb upstream 1.0kb upstream 1000 false A07: 14224811-14225810 Brassica rapa FPsc
Brara.G01378 1.0kb downstream 1.0kb downstream 4773 true A07: 14220038-14224810 Brassica rapa FPsc
Brara.G01378 1.0kb downstream 1.0kb downstream 1000 false A07: 14220038-14221037 Brassica rapa FPsc
Brara.G01378 2.0kb upstream 2.0kb upstream 5773 true A07: 14221038-14226810 Brassica rapa FPsc
Brara.G01378 2.0kb upstream 2.0kb upstream 2000 false A07: 14224811-14226810 Brassica rapa FPsc
Brara.G01378 2.0kb downstream 2.0kb downstream 5773 true A07: 14219038-14224810 Brassica rapa FPsc
Brara.G01378 2.0kb downstream 2.0kb downstream 2000 false A07: 14219038-14221037 Brassica rapa FPsc
Brara.G01378 5.0kb upstream 5.0kb upstream 8773 true A07: 14221038-14229810 Brassica rapa FPsc
Brara.G01378 5.0kb upstream 5.0kb upstream 5000 false A07: 14224811-14229810 Brassica rapa FPsc
Brara.G01378 5.0kb downstream 5.0kb downstream 8773 true A07: 14216038-14224810 Brassica rapa FPsc
Brara.G01378 5.0kb downstream 5.0kb downstream 5000 false A07: 14216038-14221037 Brassica rapa FPsc
Brara.G01378 10.0kb upstream 10.0kb upstream 13773 true A07: 14221038-14234810 Brassica rapa FPsc
Brara.G01378 10.0kb upstream 10.0kb upstream 10000 false A07: 14224811-14234810 Brassica rapa FPsc
Brara.G01378 10.0kb downstream 10.0kb downstream 13773 true A07: 14211038-14224810 Brassica rapa FPsc
Brara.G01378 10.0kb downstream 10.0kb downstream 10000 false A07: 14211038-14221037 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041225 5273 Angiosperm View MSA
122351972 5261 Brassicaceae Singleton cluster - no MSA
123790770 5264 Brassicales-Malvales Singleton cluster - no MSA
124288705 5266 SBM Singleton cluster - no MSA
124142170 5268 Malvidae Singleton cluster - no MSA
124063795 5270 Rosid View MSA
123737485 5271 Pentapetalae View MSA
122787595 5272 Eudicot View MSA
121344399 5274 Embryophyte View MSA
123425601 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier