Gene : Brara.A02961 B. rapa FPsc v1.3
Defline:  (1 of 3) 4.1.1.36 - Phosphopantothenoylcysteine decarboxylase / N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase Genomic Order:  2961
Name:  ? Brara.A02961 Secondary Identifier:  ? PAC:30639971
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc COA-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02961 0.5kb upstream 0.5kb upstream 1512 true A01: 25199032-25200543 Brassica rapa FPsc
Brara.A02961 0.5kb upstream 0.5kb upstream 500 false A01: 25199032-25199531 Brassica rapa FPsc
Brara.A02961 0.5kb downstream 0.5kb downstream 1512 true A01: 25199532-25201043 Brassica rapa FPsc
Brara.A02961 0.5kb downstream 0.5kb downstream 500 false A01: 25200544-25201043 Brassica rapa FPsc
Brara.A02961 1.0kb upstream 1.0kb upstream 2012 true A01: 25198532-25200543 Brassica rapa FPsc
Brara.A02961 1.0kb upstream 1.0kb upstream 1000 false A01: 25198532-25199531 Brassica rapa FPsc
Brara.A02961 1.0kb downstream 1.0kb downstream 2012 true A01: 25199532-25201543 Brassica rapa FPsc
Brara.A02961 1.0kb downstream 1.0kb downstream 1000 false A01: 25200544-25201543 Brassica rapa FPsc
Brara.A02961 2.0kb upstream 2.0kb upstream 3012 true A01: 25197532-25200543 Brassica rapa FPsc
Brara.A02961 2.0kb upstream 2.0kb upstream 2000 false A01: 25197532-25199531 Brassica rapa FPsc
Brara.A02961 2.0kb downstream 2.0kb downstream 3012 true A01: 25199532-25202543 Brassica rapa FPsc
Brara.A02961 2.0kb downstream 2.0kb downstream 2000 false A01: 25200544-25202543 Brassica rapa FPsc
Brara.A02961 5.0kb upstream 5.0kb upstream 6012 true A01: 25194532-25200543 Brassica rapa FPsc
Brara.A02961 5.0kb upstream 5.0kb upstream 5000 false A01: 25194532-25199531 Brassica rapa FPsc
Brara.A02961 5.0kb downstream 5.0kb downstream 6012 true A01: 25199532-25205543 Brassica rapa FPsc
Brara.A02961 5.0kb downstream 5.0kb downstream 5000 false A01: 25200544-25205543 Brassica rapa FPsc
Brara.A02961 10.0kb upstream 10.0kb upstream 11012 true A01: 25189532-25200543 Brassica rapa FPsc
Brara.A02961 10.0kb upstream 10.0kb upstream 10000 false A01: 25189532-25199531 Brassica rapa FPsc
Brara.A02961 10.0kb downstream 10.0kb downstream 11012 true A01: 25199532-25210543 Brassica rapa FPsc
Brara.A02961 10.0kb downstream 10.0kb downstream 10000 false A01: 25200544-25210543 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353045 5261 Brassicaceae Singleton cluster - no MSA
123791676 5264 Brassicales-Malvales Singleton cluster - no MSA
124350306 5266 SBM View MSA
124242007 5268 Malvidae View MSA
124065086 5270 Rosid View MSA
123739959 5271 Pentapetalae View MSA
122787988 5272 Eudicot View MSA
122043934 5273 Angiosperm View MSA
121347279 5274 Embryophyte View MSA
123427433 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier