Gene : Brara.A03004 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11709//PTHR11709:SF28 - MULTI-COPPER OXIDASE Genomic Order:  3004
Name:  ? Brara.A03004 Secondary Identifier:  ? PAC:30638787
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5466 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03004 0.5kb upstream 0.5kb upstream 2945 true A01: 25543159-25546103 Brassica rapa FPsc
Brara.A03004 0.5kb upstream 0.5kb upstream 500 false A01: 25543159-25543658 Brassica rapa FPsc
Brara.A03004 0.5kb downstream 0.5kb downstream 2945 true A01: 25543659-25546603 Brassica rapa FPsc
Brara.A03004 0.5kb downstream 0.5kb downstream 500 false A01: 25546104-25546603 Brassica rapa FPsc
Brara.A03004 1.0kb upstream 1.0kb upstream 3445 true A01: 25542659-25546103 Brassica rapa FPsc
Brara.A03004 1.0kb upstream 1.0kb upstream 1000 false A01: 25542659-25543658 Brassica rapa FPsc
Brara.A03004 1.0kb downstream 1.0kb downstream 3445 true A01: 25543659-25547103 Brassica rapa FPsc
Brara.A03004 1.0kb downstream 1.0kb downstream 1000 false A01: 25546104-25547103 Brassica rapa FPsc
Brara.A03004 2.0kb upstream 2.0kb upstream 4445 true A01: 25541659-25546103 Brassica rapa FPsc
Brara.A03004 2.0kb upstream 2.0kb upstream 2000 false A01: 25541659-25543658 Brassica rapa FPsc
Brara.A03004 2.0kb downstream 2.0kb downstream 4445 true A01: 25543659-25548103 Brassica rapa FPsc
Brara.A03004 2.0kb downstream 2.0kb downstream 2000 false A01: 25546104-25548103 Brassica rapa FPsc
Brara.A03004 5.0kb upstream 5.0kb upstream 7445 true A01: 25538659-25546103 Brassica rapa FPsc
Brara.A03004 5.0kb upstream 5.0kb upstream 5000 false A01: 25538659-25543658 Brassica rapa FPsc
Brara.A03004 5.0kb downstream 5.0kb downstream 7445 true A01: 25543659-25551103 Brassica rapa FPsc
Brara.A03004 5.0kb downstream 5.0kb downstream 5000 false A01: 25546104-25551103 Brassica rapa FPsc
Brara.A03004 10.0kb upstream 10.0kb upstream 12445 true A01: 25533659-25546103 Brassica rapa FPsc
Brara.A03004 10.0kb upstream 10.0kb upstream 10000 false A01: 25533659-25543658 Brassica rapa FPsc
Brara.A03004 10.0kb downstream 10.0kb downstream 12445 true A01: 25543659-25556103 Brassica rapa FPsc
Brara.A03004 10.0kb downstream 10.0kb downstream 10000 false A01: 25546104-25556103 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373963 5261 Brassicaceae View MSA
123836254 5264 Brassicales-Malvales View MSA
124342178 5266 SBM View MSA
124254383 5268 Malvidae View MSA
124065870 5270 Rosid View MSA
123745907 5271 Pentapetalae View MSA
122793198 5272 Eudicot View MSA
122046121 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier