Gene : Brara.G01167 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR23315:SF7 - U-BOX DOMAIN-CONTAINING PROTEIN 2-RELATED Genomic Order:  1167
Name:  ? Brara.G01167 Secondary Identifier:  ? PAC:30633714
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01167 0.5kb upstream 0.5kb upstream 3264 true A07: 12810334-12813597 Brassica rapa FPsc
Brara.G01167 0.5kb upstream 0.5kb upstream 500 false A07: 12813098-12813597 Brassica rapa FPsc
Brara.G01167 0.5kb downstream 0.5kb downstream 3264 true A07: 12809834-12813097 Brassica rapa FPsc
Brara.G01167 0.5kb downstream 0.5kb downstream 500 false A07: 12809834-12810333 Brassica rapa FPsc
Brara.G01167 1.0kb upstream 1.0kb upstream 3764 true A07: 12810334-12814097 Brassica rapa FPsc
Brara.G01167 1.0kb upstream 1.0kb upstream 1000 false A07: 12813098-12814097 Brassica rapa FPsc
Brara.G01167 1.0kb downstream 1.0kb downstream 3764 true A07: 12809334-12813097 Brassica rapa FPsc
Brara.G01167 1.0kb downstream 1.0kb downstream 1000 false A07: 12809334-12810333 Brassica rapa FPsc
Brara.G01167 2.0kb upstream 2.0kb upstream 4764 true A07: 12810334-12815097 Brassica rapa FPsc
Brara.G01167 2.0kb upstream 2.0kb upstream 2000 false A07: 12813098-12815097 Brassica rapa FPsc
Brara.G01167 2.0kb downstream 2.0kb downstream 4764 true A07: 12808334-12813097 Brassica rapa FPsc
Brara.G01167 2.0kb downstream 2.0kb downstream 2000 false A07: 12808334-12810333 Brassica rapa FPsc
Brara.G01167 5.0kb upstream 5.0kb upstream 7764 true A07: 12810334-12818097 Brassica rapa FPsc
Brara.G01167 5.0kb upstream 5.0kb upstream 5000 false A07: 12813098-12818097 Brassica rapa FPsc
Brara.G01167 5.0kb downstream 5.0kb downstream 7764 true A07: 12805334-12813097 Brassica rapa FPsc
Brara.G01167 5.0kb downstream 5.0kb downstream 5000 false A07: 12805334-12810333 Brassica rapa FPsc
Brara.G01167 10.0kb upstream 10.0kb upstream 12764 true A07: 12810334-12823097 Brassica rapa FPsc
Brara.G01167 10.0kb upstream 10.0kb upstream 10000 false A07: 12813098-12823097 Brassica rapa FPsc
Brara.G01167 10.0kb downstream 10.0kb downstream 12764 true A07: 12800334-12813097 Brassica rapa FPsc
Brara.G01167 10.0kb downstream 10.0kb downstream 10000 false A07: 12800334-12810333 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351480 5261 Brassicaceae Singleton cluster - no MSA
123842347 5264 Brassicales-Malvales View MSA
124323418 5266 SBM View MSA
124256079 5268 Malvidae View MSA
124065009 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier