Gene : Brara.G01003 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR11695:SF492 - ALCOHOL DEHYDROGENASE-LIKE 1-RELATED Genomic Order:  1003
Name:  ? Brara.G01003 Secondary Identifier:  ? PAC:30634856
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5486 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5751 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6333 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-21 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-389 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6802 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01003 0.5kb upstream 0.5kb upstream 3762 true A07: 11525826-11529587 Brassica rapa FPsc
Brara.G01003 0.5kb upstream 0.5kb upstream 500 false A07: 11529088-11529587 Brassica rapa FPsc
Brara.G01003 0.5kb downstream 0.5kb downstream 3762 true A07: 11525326-11529087 Brassica rapa FPsc
Brara.G01003 0.5kb downstream 0.5kb downstream 500 false A07: 11525326-11525825 Brassica rapa FPsc
Brara.G01003 1.0kb upstream 1.0kb upstream 4262 true A07: 11525826-11530087 Brassica rapa FPsc
Brara.G01003 1.0kb upstream 1.0kb upstream 1000 false A07: 11529088-11530087 Brassica rapa FPsc
Brara.G01003 1.0kb downstream 1.0kb downstream 4262 true A07: 11524826-11529087 Brassica rapa FPsc
Brara.G01003 1.0kb downstream 1.0kb downstream 1000 false A07: 11524826-11525825 Brassica rapa FPsc
Brara.G01003 2.0kb upstream 2.0kb upstream 5262 true A07: 11525826-11531087 Brassica rapa FPsc
Brara.G01003 2.0kb upstream 2.0kb upstream 2000 false A07: 11529088-11531087 Brassica rapa FPsc
Brara.G01003 2.0kb downstream 2.0kb downstream 5262 true A07: 11523826-11529087 Brassica rapa FPsc
Brara.G01003 2.0kb downstream 2.0kb downstream 2000 false A07: 11523826-11525825 Brassica rapa FPsc
Brara.G01003 5.0kb upstream 5.0kb upstream 8262 true A07: 11525826-11534087 Brassica rapa FPsc
Brara.G01003 5.0kb upstream 5.0kb upstream 5000 false A07: 11529088-11534087 Brassica rapa FPsc
Brara.G01003 5.0kb downstream 5.0kb downstream 8262 true A07: 11520826-11529087 Brassica rapa FPsc
Brara.G01003 5.0kb downstream 5.0kb downstream 5000 false A07: 11520826-11525825 Brassica rapa FPsc
Brara.G01003 10.0kb upstream 10.0kb upstream 13262 true A07: 11525826-11539087 Brassica rapa FPsc
Brara.G01003 10.0kb upstream 10.0kb upstream 10000 false A07: 11529088-11539087 Brassica rapa FPsc
Brara.G01003 10.0kb downstream 10.0kb downstream 13262 true A07: 11515826-11529087 Brassica rapa FPsc
Brara.G01003 10.0kb downstream 10.0kb downstream 10000 false A07: 11515826-11525825 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351778 5261 Brassicaceae Singleton cluster - no MSA
123839438 5264 Brassicales-Malvales View MSA
124339992 5266 SBM View MSA
124250138 5268 Malvidae View MSA
124072751 5270 Rosid View MSA
123744522 5271 Pentapetalae View MSA
122796931 5272 Eudicot View MSA
122046886 5273 Angiosperm View MSA
121310668 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier