Gene : Brara.A02726 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Genomic Order:  2726
Name:  ? Brara.A02726 Secondary Identifier:  ? PAC:30638242
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02726 0.5kb upstream 0.5kb upstream 6971 true A01: 23040118-23047088 Brassica rapa FPsc
Brara.A02726 0.5kb upstream 0.5kb upstream 500 false A01: 23046589-23047088 Brassica rapa FPsc
Brara.A02726 0.5kb downstream 0.5kb downstream 6971 true A01: 23039618-23046588 Brassica rapa FPsc
Brara.A02726 0.5kb downstream 0.5kb downstream 500 false A01: 23039618-23040117 Brassica rapa FPsc
Brara.A02726 1.0kb upstream 1.0kb upstream 7471 true A01: 23040118-23047588 Brassica rapa FPsc
Brara.A02726 1.0kb upstream 1.0kb upstream 1000 false A01: 23046589-23047588 Brassica rapa FPsc
Brara.A02726 1.0kb downstream 1.0kb downstream 7471 true A01: 23039118-23046588 Brassica rapa FPsc
Brara.A02726 1.0kb downstream 1.0kb downstream 1000 false A01: 23039118-23040117 Brassica rapa FPsc
Brara.A02726 2.0kb upstream 2.0kb upstream 8471 true A01: 23040118-23048588 Brassica rapa FPsc
Brara.A02726 2.0kb upstream 2.0kb upstream 2000 false A01: 23046589-23048588 Brassica rapa FPsc
Brara.A02726 2.0kb downstream 2.0kb downstream 8471 true A01: 23038118-23046588 Brassica rapa FPsc
Brara.A02726 2.0kb downstream 2.0kb downstream 2000 false A01: 23038118-23040117 Brassica rapa FPsc
Brara.A02726 5.0kb upstream 5.0kb upstream 11471 true A01: 23040118-23051588 Brassica rapa FPsc
Brara.A02726 5.0kb upstream 5.0kb upstream 5000 false A01: 23046589-23051588 Brassica rapa FPsc
Brara.A02726 5.0kb downstream 5.0kb downstream 11471 true A01: 23035118-23046588 Brassica rapa FPsc
Brara.A02726 5.0kb downstream 5.0kb downstream 5000 false A01: 23035118-23040117 Brassica rapa FPsc
Brara.A02726 10.0kb upstream 10.0kb upstream 16471 true A01: 23040118-23056588 Brassica rapa FPsc
Brara.A02726 10.0kb upstream 10.0kb upstream 10000 false A01: 23046589-23056588 Brassica rapa FPsc
Brara.A02726 10.0kb downstream 10.0kb downstream 16471 true A01: 23030118-23046588 Brassica rapa FPsc
Brara.A02726 10.0kb downstream 10.0kb downstream 10000 false A01: 23030118-23040117 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352604 5261 Brassicaceae Singleton cluster - no MSA
123791316 5264 Brassicales-Malvales Singleton cluster - no MSA
124289234 5266 SBM Singleton cluster - no MSA
124142607 5268 Malvidae Singleton cluster - no MSA
123869458 5270 Rosid Singleton cluster - no MSA
123454016 5271 Pentapetalae Singleton cluster - no MSA
122489469 5272 Eudicot Singleton cluster - no MSA
122049796 5273 Angiosperm View MSA
121350697 5274 Embryophyte View MSA
123381850 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier