Gene : Brara.G00869 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR24322:SF619 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE, CHLOROPLASTIC Genomic Order:  869
Name:  ? Brara.G00869 Secondary Identifier:  ? PAC:30633074
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc FASYN-ELONG-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5156 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5971 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5973 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5989 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6282 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7388 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7663 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00869 0.5kb upstream 0.5kb upstream 3110 true A07: 10484218-10487327 Brassica rapa FPsc
Brara.G00869 0.5kb upstream 0.5kb upstream 500 false A07: 10484218-10484717 Brassica rapa FPsc
Brara.G00869 0.5kb downstream 0.5kb downstream 3110 true A07: 10484718-10487827 Brassica rapa FPsc
Brara.G00869 0.5kb downstream 0.5kb downstream 500 false A07: 10487328-10487827 Brassica rapa FPsc
Brara.G00869 1.0kb upstream 1.0kb upstream 3610 true A07: 10483718-10487327 Brassica rapa FPsc
Brara.G00869 1.0kb upstream 1.0kb upstream 1000 false A07: 10483718-10484717 Brassica rapa FPsc
Brara.G00869 1.0kb downstream 1.0kb downstream 3610 true A07: 10484718-10488327 Brassica rapa FPsc
Brara.G00869 1.0kb downstream 1.0kb downstream 1000 false A07: 10487328-10488327 Brassica rapa FPsc
Brara.G00869 2.0kb upstream 2.0kb upstream 4610 true A07: 10482718-10487327 Brassica rapa FPsc
Brara.G00869 2.0kb upstream 2.0kb upstream 2000 false A07: 10482718-10484717 Brassica rapa FPsc
Brara.G00869 2.0kb downstream 2.0kb downstream 4610 true A07: 10484718-10489327 Brassica rapa FPsc
Brara.G00869 2.0kb downstream 2.0kb downstream 2000 false A07: 10487328-10489327 Brassica rapa FPsc
Brara.G00869 5.0kb upstream 5.0kb upstream 7610 true A07: 10479718-10487327 Brassica rapa FPsc
Brara.G00869 5.0kb upstream 5.0kb upstream 5000 false A07: 10479718-10484717 Brassica rapa FPsc
Brara.G00869 5.0kb downstream 5.0kb downstream 7610 true A07: 10484718-10492327 Brassica rapa FPsc
Brara.G00869 5.0kb downstream 5.0kb downstream 5000 false A07: 10487328-10492327 Brassica rapa FPsc
Brara.G00869 10.0kb upstream 10.0kb upstream 12610 true A07: 10474718-10487327 Brassica rapa FPsc
Brara.G00869 10.0kb upstream 10.0kb upstream 10000 false A07: 10474718-10484717 Brassica rapa FPsc
Brara.G00869 10.0kb downstream 10.0kb downstream 12610 true A07: 10484718-10497327 Brassica rapa FPsc
Brara.G00869 10.0kb downstream 10.0kb downstream 10000 false A07: 10487328-10497327 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351317 5261 Brassicaceae Singleton cluster - no MSA
123790225 5264 Brassicales-Malvales Singleton cluster - no MSA
124288190 5266 SBM Singleton cluster - no MSA
124141744 5268 Malvidae Singleton cluster - no MSA
124071251 5270 Rosid View MSA
123740776 5271 Pentapetalae View MSA
122787296 5272 Eudicot View MSA
122042809 5273 Angiosperm View MSA
121347149 5274 Embryophyte View MSA
123428494 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier