Gene : Brara.G00969 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR11002:SF15 - CARBONIC ANHYDRASE Genomic Order:  969
Name:  ? Brara.G00969 Secondary Identifier:  ? PAC:30632915
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CYANCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-241 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7117 Brassica rapa FPsc pathologic  
BrapaFPsc PWYQT-4429 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00969 0.5kb upstream 0.5kb upstream 3671 true A07: 11321673-11325343 Brassica rapa FPsc
Brara.G00969 0.5kb upstream 0.5kb upstream 500 false A07: 11324844-11325343 Brassica rapa FPsc
Brara.G00969 0.5kb downstream 0.5kb downstream 3671 true A07: 11321173-11324843 Brassica rapa FPsc
Brara.G00969 0.5kb downstream 0.5kb downstream 500 false A07: 11321173-11321672 Brassica rapa FPsc
Brara.G00969 1.0kb upstream 1.0kb upstream 4171 true A07: 11321673-11325843 Brassica rapa FPsc
Brara.G00969 1.0kb upstream 1.0kb upstream 1000 false A07: 11324844-11325843 Brassica rapa FPsc
Brara.G00969 1.0kb downstream 1.0kb downstream 4171 true A07: 11320673-11324843 Brassica rapa FPsc
Brara.G00969 1.0kb downstream 1.0kb downstream 1000 false A07: 11320673-11321672 Brassica rapa FPsc
Brara.G00969 2.0kb upstream 2.0kb upstream 5171 true A07: 11321673-11326843 Brassica rapa FPsc
Brara.G00969 2.0kb upstream 2.0kb upstream 2000 false A07: 11324844-11326843 Brassica rapa FPsc
Brara.G00969 2.0kb downstream 2.0kb downstream 5171 true A07: 11319673-11324843 Brassica rapa FPsc
Brara.G00969 2.0kb downstream 2.0kb downstream 2000 false A07: 11319673-11321672 Brassica rapa FPsc
Brara.G00969 5.0kb upstream 5.0kb upstream 8171 true A07: 11321673-11329843 Brassica rapa FPsc
Brara.G00969 5.0kb upstream 5.0kb upstream 5000 false A07: 11324844-11329843 Brassica rapa FPsc
Brara.G00969 5.0kb downstream 5.0kb downstream 8171 true A07: 11316673-11324843 Brassica rapa FPsc
Brara.G00969 5.0kb downstream 5.0kb downstream 5000 false A07: 11316673-11321672 Brassica rapa FPsc
Brara.G00969 10.0kb upstream 10.0kb upstream 13171 true A07: 11321673-11334843 Brassica rapa FPsc
Brara.G00969 10.0kb upstream 10.0kb upstream 10000 false A07: 11324844-11334843 Brassica rapa FPsc
Brara.G00969 10.0kb downstream 10.0kb downstream 13171 true A07: 11311673-11324843 Brassica rapa FPsc
Brara.G00969 10.0kb downstream 10.0kb downstream 10000 false A07: 11311673-11321672 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366965 5261 Brassicaceae View MSA
123799271 5264 Brassicales-Malvales View MSA
124296809 5266 SBM View MSA
124252567 5268 Malvidae View MSA
124069679 5270 Rosid View MSA
123748034 5271 Pentapetalae View MSA
122785685 5272 Eudicot View MSA
122044024 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier