Gene : Brara.D01483 B. rapa FPsc v1.3
Defline:  (1 of 14) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) Genomic Order:  1483
Name:  ? Brara.D01483 Secondary Identifier:  ? PAC:30621559
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01483 0.5kb upstream 0.5kb upstream 2839 true A04: 13310960-13313798 Brassica rapa FPsc
Brara.D01483 0.5kb upstream 0.5kb upstream 500 false A04: 13310960-13311459 Brassica rapa FPsc
Brara.D01483 0.5kb downstream 0.5kb downstream 2839 true A04: 13311460-13314298 Brassica rapa FPsc
Brara.D01483 0.5kb downstream 0.5kb downstream 500 false A04: 13313799-13314298 Brassica rapa FPsc
Brara.D01483 1.0kb upstream 1.0kb upstream 3339 true A04: 13310460-13313798 Brassica rapa FPsc
Brara.D01483 1.0kb upstream 1.0kb upstream 1000 false A04: 13310460-13311459 Brassica rapa FPsc
Brara.D01483 1.0kb downstream 1.0kb downstream 3339 true A04: 13311460-13314798 Brassica rapa FPsc
Brara.D01483 1.0kb downstream 1.0kb downstream 1000 false A04: 13313799-13314798 Brassica rapa FPsc
Brara.D01483 2.0kb upstream 2.0kb upstream 4339 true A04: 13309460-13313798 Brassica rapa FPsc
Brara.D01483 2.0kb upstream 2.0kb upstream 2000 false A04: 13309460-13311459 Brassica rapa FPsc
Brara.D01483 2.0kb downstream 2.0kb downstream 4339 true A04: 13311460-13315798 Brassica rapa FPsc
Brara.D01483 2.0kb downstream 2.0kb downstream 2000 false A04: 13313799-13315798 Brassica rapa FPsc
Brara.D01483 5.0kb upstream 5.0kb upstream 7339 true A04: 13306460-13313798 Brassica rapa FPsc
Brara.D01483 5.0kb upstream 5.0kb upstream 5000 false A04: 13306460-13311459 Brassica rapa FPsc
Brara.D01483 5.0kb downstream 5.0kb downstream 7339 true A04: 13311460-13318798 Brassica rapa FPsc
Brara.D01483 5.0kb downstream 5.0kb downstream 5000 false A04: 13313799-13318798 Brassica rapa FPsc
Brara.D01483 10.0kb upstream 10.0kb upstream 12339 true A04: 13301460-13313798 Brassica rapa FPsc
Brara.D01483 10.0kb upstream 10.0kb upstream 10000 false A04: 13301460-13311459 Brassica rapa FPsc
Brara.D01483 10.0kb downstream 10.0kb downstream 12339 true A04: 13311460-13323798 Brassica rapa FPsc
Brara.D01483 10.0kb downstream 10.0kb downstream 10000 false A04: 13313799-13323798 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348651 5261 Brassicaceae Singleton cluster - no MSA
123787959 5264 Brassicales-Malvales Singleton cluster - no MSA
124286008 5266 SBM Singleton cluster - no MSA
124250665 5268 Malvidae View MSA
124069927 5270 Rosid View MSA
123750776 5271 Pentapetalae View MSA
122794674 5272 Eudicot View MSA
122050337 5273 Angiosperm View MSA
121345725 5274 Embryophyte View MSA
123428073 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier