Gene : Brara.A02643 B. rapa FPsc v1.3
Defline:  (1 of 6) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  2643
Name:  ? Brara.A02643 Secondary Identifier:  ? PAC:30637014
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4942 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02643 0.5kb upstream 0.5kb upstream 4374 true A01: 22148568-22152941 Brassica rapa FPsc
Brara.A02643 0.5kb upstream 0.5kb upstream 500 false A01: 22152442-22152941 Brassica rapa FPsc
Brara.A02643 0.5kb downstream 0.5kb downstream 4374 true A01: 22148068-22152441 Brassica rapa FPsc
Brara.A02643 0.5kb downstream 0.5kb downstream 500 false A01: 22148068-22148567 Brassica rapa FPsc
Brara.A02643 1.0kb upstream 1.0kb upstream 4874 true A01: 22148568-22153441 Brassica rapa FPsc
Brara.A02643 1.0kb upstream 1.0kb upstream 1000 false A01: 22152442-22153441 Brassica rapa FPsc
Brara.A02643 1.0kb downstream 1.0kb downstream 4874 true A01: 22147568-22152441 Brassica rapa FPsc
Brara.A02643 1.0kb downstream 1.0kb downstream 1000 false A01: 22147568-22148567 Brassica rapa FPsc
Brara.A02643 2.0kb upstream 2.0kb upstream 5874 true A01: 22148568-22154441 Brassica rapa FPsc
Brara.A02643 2.0kb upstream 2.0kb upstream 2000 false A01: 22152442-22154441 Brassica rapa FPsc
Brara.A02643 2.0kb downstream 2.0kb downstream 5874 true A01: 22146568-22152441 Brassica rapa FPsc
Brara.A02643 2.0kb downstream 2.0kb downstream 2000 false A01: 22146568-22148567 Brassica rapa FPsc
Brara.A02643 5.0kb upstream 5.0kb upstream 8874 true A01: 22148568-22157441 Brassica rapa FPsc
Brara.A02643 5.0kb upstream 5.0kb upstream 5000 false A01: 22152442-22157441 Brassica rapa FPsc
Brara.A02643 5.0kb downstream 5.0kb downstream 8874 true A01: 22143568-22152441 Brassica rapa FPsc
Brara.A02643 5.0kb downstream 5.0kb downstream 5000 false A01: 22143568-22148567 Brassica rapa FPsc
Brara.A02643 10.0kb upstream 10.0kb upstream 13874 true A01: 22148568-22162441 Brassica rapa FPsc
Brara.A02643 10.0kb upstream 10.0kb upstream 10000 false A01: 22152442-22162441 Brassica rapa FPsc
Brara.A02643 10.0kb downstream 10.0kb downstream 13874 true A01: 22138568-22152441 Brassica rapa FPsc
Brara.A02643 10.0kb downstream 10.0kb downstream 10000 false A01: 22138568-22148567 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378227 5261 Brassicaceae View MSA
123836708 5264 Brassicales-Malvales View MSA
124347136 5266 SBM View MSA
124247291 5268 Malvidae View MSA
124064151 5270 Rosid View MSA
123753526 5271 Pentapetalae View MSA
122793663 5272 Eudicot View MSA
122044798 5273 Angiosperm View MSA
121344638 5274 Embryophyte View MSA
123426651 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier