Gene : Brara.G00600 B. rapa FPsc v1.3
Defline:  (1 of 6) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  600
Name:  ? Brara.G00600 Secondary Identifier:  ? PAC:30633606
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4942 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00600 0.5kb upstream 0.5kb upstream 6543 true A07: 7678769-7685311 Brassica rapa FPsc
Brara.G00600 0.5kb upstream 0.5kb upstream 500 false A07: 7678769-7679268 Brassica rapa FPsc
Brara.G00600 0.5kb downstream 0.5kb downstream 6543 true A07: 7679269-7685811 Brassica rapa FPsc
Brara.G00600 0.5kb downstream 0.5kb downstream 500 false A07: 7685312-7685811 Brassica rapa FPsc
Brara.G00600 1.0kb upstream 1.0kb upstream 7043 true A07: 7678269-7685311 Brassica rapa FPsc
Brara.G00600 1.0kb upstream 1.0kb upstream 1000 false A07: 7678269-7679268 Brassica rapa FPsc
Brara.G00600 1.0kb downstream 1.0kb downstream 7043 true A07: 7679269-7686311 Brassica rapa FPsc
Brara.G00600 1.0kb downstream 1.0kb downstream 1000 false A07: 7685312-7686311 Brassica rapa FPsc
Brara.G00600 2.0kb upstream 2.0kb upstream 8043 true A07: 7677269-7685311 Brassica rapa FPsc
Brara.G00600 2.0kb upstream 2.0kb upstream 2000 false A07: 7677269-7679268 Brassica rapa FPsc
Brara.G00600 2.0kb downstream 2.0kb downstream 8043 true A07: 7679269-7687311 Brassica rapa FPsc
Brara.G00600 2.0kb downstream 2.0kb downstream 2000 false A07: 7685312-7687311 Brassica rapa FPsc
Brara.G00600 5.0kb upstream 5.0kb upstream 11043 true A07: 7674269-7685311 Brassica rapa FPsc
Brara.G00600 5.0kb upstream 5.0kb upstream 5000 false A07: 7674269-7679268 Brassica rapa FPsc
Brara.G00600 5.0kb downstream 5.0kb downstream 11043 true A07: 7679269-7690311 Brassica rapa FPsc
Brara.G00600 5.0kb downstream 5.0kb downstream 5000 false A07: 7685312-7690311 Brassica rapa FPsc
Brara.G00600 10.0kb upstream 10.0kb upstream 16043 true A07: 7669269-7685311 Brassica rapa FPsc
Brara.G00600 10.0kb upstream 10.0kb upstream 10000 false A07: 7669269-7679268 Brassica rapa FPsc
Brara.G00600 10.0kb downstream 10.0kb downstream 16043 true A07: 7679269-7695311 Brassica rapa FPsc
Brara.G00600 10.0kb downstream 10.0kb downstream 10000 false A07: 7685312-7695311 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362173 5261 Brassicaceae View MSA
123828465 5264 Brassicales-Malvales View MSA
124338793 5266 SBM View MSA
124251387 5268 Malvidae View MSA
124060864 5270 Rosid View MSA
123737400 5271 Pentapetalae View MSA
122792723 5272 Eudicot View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier