Gene : Brara.A02688 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11817:SF14 - PLASTIDIAL PYRUVATE KINASE 1, CHLOROPLASTIC Genomic Order:  2688
Name:  ? Brara.A02688 Secondary Identifier:  ? PAC:30638385
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ANAEROFRUCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ANAGLYCOLYSIS-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-1042 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5723 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A02688 0.5kb upstream 0.5kb upstream 2895 true A01: 22657678-22660572 Brassica rapa FPsc
Brara.A02688 0.5kb upstream 0.5kb upstream 500 false A01: 22660073-22660572 Brassica rapa FPsc
Brara.A02688 0.5kb downstream 0.5kb downstream 2895 true A01: 22657178-22660072 Brassica rapa FPsc
Brara.A02688 0.5kb downstream 0.5kb downstream 500 false A01: 22657178-22657677 Brassica rapa FPsc
Brara.A02688 1.0kb upstream 1.0kb upstream 3395 true A01: 22657678-22661072 Brassica rapa FPsc
Brara.A02688 1.0kb upstream 1.0kb upstream 1000 false A01: 22660073-22661072 Brassica rapa FPsc
Brara.A02688 1.0kb downstream 1.0kb downstream 3395 true A01: 22656678-22660072 Brassica rapa FPsc
Brara.A02688 1.0kb downstream 1.0kb downstream 1000 false A01: 22656678-22657677 Brassica rapa FPsc
Brara.A02688 2.0kb upstream 2.0kb upstream 4395 true A01: 22657678-22662072 Brassica rapa FPsc
Brara.A02688 2.0kb upstream 2.0kb upstream 2000 false A01: 22660073-22662072 Brassica rapa FPsc
Brara.A02688 2.0kb downstream 2.0kb downstream 4395 true A01: 22655678-22660072 Brassica rapa FPsc
Brara.A02688 2.0kb downstream 2.0kb downstream 2000 false A01: 22655678-22657677 Brassica rapa FPsc
Brara.A02688 5.0kb upstream 5.0kb upstream 7395 true A01: 22657678-22665072 Brassica rapa FPsc
Brara.A02688 5.0kb upstream 5.0kb upstream 5000 false A01: 22660073-22665072 Brassica rapa FPsc
Brara.A02688 5.0kb downstream 5.0kb downstream 7395 true A01: 22652678-22660072 Brassica rapa FPsc
Brara.A02688 5.0kb downstream 5.0kb downstream 5000 false A01: 22652678-22657677 Brassica rapa FPsc
Brara.A02688 10.0kb upstream 10.0kb upstream 12395 true A01: 22657678-22670072 Brassica rapa FPsc
Brara.A02688 10.0kb upstream 10.0kb upstream 10000 false A01: 22660073-22670072 Brassica rapa FPsc
Brara.A02688 10.0kb downstream 10.0kb downstream 12395 true A01: 22647678-22660072 Brassica rapa FPsc
Brara.A02688 10.0kb downstream 10.0kb downstream 10000 false A01: 22647678-22657677 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361118 5261 Brassicaceae View MSA
123830504 5264 Brassicales-Malvales View MSA
124343810 5266 SBM View MSA
124241704 5268 Malvidae View MSA
124069917 5270 Rosid View MSA
123742502 5271 Pentapetalae View MSA
122795154 5272 Eudicot View MSA
122047085 5273 Angiosperm View MSA
121351198 5274 Embryophyte View MSA
123423773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier