Gene : Brara.A03416 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 Genomic Order:  3416
Name:  ? Brara.A03416 Secondary Identifier:  ? PAC:30638649
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03416 0.5kb upstream 0.5kb upstream 4670 true A01: 28064175-28068844 Brassica rapa FPsc
Brara.A03416 0.5kb upstream 0.5kb upstream 500 false A01: 28068345-28068844 Brassica rapa FPsc
Brara.A03416 0.5kb downstream 0.5kb downstream 4670 true A01: 28063675-28068344 Brassica rapa FPsc
Brara.A03416 0.5kb downstream 0.5kb downstream 500 false A01: 28063675-28064174 Brassica rapa FPsc
Brara.A03416 1.0kb upstream 1.0kb upstream 5170 true A01: 28064175-28069344 Brassica rapa FPsc
Brara.A03416 1.0kb upstream 1.0kb upstream 1000 false A01: 28068345-28069344 Brassica rapa FPsc
Brara.A03416 1.0kb downstream 1.0kb downstream 5170 true A01: 28063175-28068344 Brassica rapa FPsc
Brara.A03416 1.0kb downstream 1.0kb downstream 1000 false A01: 28063175-28064174 Brassica rapa FPsc
Brara.A03416 2.0kb upstream 2.0kb upstream 6170 true A01: 28064175-28070344 Brassica rapa FPsc
Brara.A03416 2.0kb upstream 2.0kb upstream 2000 false A01: 28068345-28070344 Brassica rapa FPsc
Brara.A03416 2.0kb downstream 2.0kb downstream 6170 true A01: 28062175-28068344 Brassica rapa FPsc
Brara.A03416 2.0kb downstream 2.0kb downstream 2000 false A01: 28062175-28064174 Brassica rapa FPsc
Brara.A03416 5.0kb upstream 5.0kb upstream 9170 true A01: 28064175-28073344 Brassica rapa FPsc
Brara.A03416 5.0kb upstream 5.0kb upstream 5000 false A01: 28068345-28073344 Brassica rapa FPsc
Brara.A03416 5.0kb downstream 5.0kb downstream 9170 true A01: 28059175-28068344 Brassica rapa FPsc
Brara.A03416 5.0kb downstream 5.0kb downstream 5000 false A01: 28059175-28064174 Brassica rapa FPsc
Brara.A03416 10.0kb upstream 10.0kb upstream 14170 true A01: 28064175-28078344 Brassica rapa FPsc
Brara.A03416 10.0kb upstream 10.0kb upstream 10000 false A01: 28068345-28078344 Brassica rapa FPsc
Brara.A03416 10.0kb downstream 10.0kb downstream 14170 true A01: 28054175-28068344 Brassica rapa FPsc
Brara.A03416 10.0kb downstream 10.0kb downstream 10000 false A01: 28054175-28064174 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379047 5261 Brassicaceae View MSA
123838066 5264 Brassicales-Malvales View MSA
124346665 5266 SBM View MSA
124247109 5268 Malvidae View MSA
124069298 5270 Rosid View MSA
123746995 5271 Pentapetalae View MSA
122794843 5272 Eudicot View MSA
122048690 5273 Angiosperm View MSA
121348178 5274 Embryophyte View MSA
123426142 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier