Gene : Brara.A03407 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10641:SF540 - MYB TRANSCRIPTION FACTOR Genomic Order:  3407
Name:  ? Brara.A03407 Secondary Identifier:  ? PAC:30638722
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03407 0.5kb upstream 0.5kb upstream 3115 true A01: 27997536-28000650 Brassica rapa FPsc
Brara.A03407 0.5kb upstream 0.5kb upstream 500 false A01: 28000151-28000650 Brassica rapa FPsc
Brara.A03407 0.5kb downstream 0.5kb downstream 3115 true A01: 27997036-28000150 Brassica rapa FPsc
Brara.A03407 0.5kb downstream 0.5kb downstream 500 false A01: 27997036-27997535 Brassica rapa FPsc
Brara.A03407 1.0kb upstream 1.0kb upstream 3615 true A01: 27997536-28001150 Brassica rapa FPsc
Brara.A03407 1.0kb upstream 1.0kb upstream 1000 false A01: 28000151-28001150 Brassica rapa FPsc
Brara.A03407 1.0kb downstream 1.0kb downstream 3615 true A01: 27996536-28000150 Brassica rapa FPsc
Brara.A03407 1.0kb downstream 1.0kb downstream 1000 false A01: 27996536-27997535 Brassica rapa FPsc
Brara.A03407 2.0kb upstream 2.0kb upstream 4615 true A01: 27997536-28002150 Brassica rapa FPsc
Brara.A03407 2.0kb upstream 2.0kb upstream 2000 false A01: 28000151-28002150 Brassica rapa FPsc
Brara.A03407 2.0kb downstream 2.0kb downstream 4615 true A01: 27995536-28000150 Brassica rapa FPsc
Brara.A03407 2.0kb downstream 2.0kb downstream 2000 false A01: 27995536-27997535 Brassica rapa FPsc
Brara.A03407 5.0kb upstream 5.0kb upstream 7615 true A01: 27997536-28005150 Brassica rapa FPsc
Brara.A03407 5.0kb upstream 5.0kb upstream 5000 false A01: 28000151-28005150 Brassica rapa FPsc
Brara.A03407 5.0kb downstream 5.0kb downstream 7615 true A01: 27992536-28000150 Brassica rapa FPsc
Brara.A03407 5.0kb downstream 5.0kb downstream 5000 false A01: 27992536-27997535 Brassica rapa FPsc
Brara.A03407 10.0kb upstream 10.0kb upstream 12615 true A01: 27997536-28010150 Brassica rapa FPsc
Brara.A03407 10.0kb upstream 10.0kb upstream 10000 false A01: 28000151-28010150 Brassica rapa FPsc
Brara.A03407 10.0kb downstream 10.0kb downstream 12615 true A01: 27987536-28000150 Brassica rapa FPsc
Brara.A03407 10.0kb downstream 10.0kb downstream 10000 false A01: 27987536-27997535 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352734 5261 Brassicaceae Singleton cluster - no MSA
123791424 5264 Brassicales-Malvales Singleton cluster - no MSA
124289338 5266 SBM Singleton cluster - no MSA
124142695 5268 Malvidae Singleton cluster - no MSA
123869529 5270 Rosid Singleton cluster - no MSA
123747278 5271 Pentapetalae View MSA
122786891 5272 Eudicot View MSA
122046839 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121350966 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier