Gene : Brara.A03405 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10553//PTHR10553:SF9 - SMALL NUCLEAR RIBONUCLEOPROTEIN Genomic Order:  3405
Name:  ? Brara.A03405 Secondary Identifier:  ? PAC:30637310
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03405 0.5kb upstream 0.5kb upstream 1539 true A01: 27991896-27993434 Brassica rapa FPsc
Brara.A03405 0.5kb upstream 0.5kb upstream 500 false A01: 27991896-27992395 Brassica rapa FPsc
Brara.A03405 0.5kb downstream 0.5kb downstream 1539 true A01: 27992396-27993934 Brassica rapa FPsc
Brara.A03405 0.5kb downstream 0.5kb downstream 500 false A01: 27993435-27993934 Brassica rapa FPsc
Brara.A03405 1.0kb upstream 1.0kb upstream 2039 true A01: 27991396-27993434 Brassica rapa FPsc
Brara.A03405 1.0kb upstream 1.0kb upstream 1000 false A01: 27991396-27992395 Brassica rapa FPsc
Brara.A03405 1.0kb downstream 1.0kb downstream 2039 true A01: 27992396-27994434 Brassica rapa FPsc
Brara.A03405 1.0kb downstream 1.0kb downstream 1000 false A01: 27993435-27994434 Brassica rapa FPsc
Brara.A03405 2.0kb upstream 2.0kb upstream 3039 true A01: 27990396-27993434 Brassica rapa FPsc
Brara.A03405 2.0kb upstream 2.0kb upstream 2000 false A01: 27990396-27992395 Brassica rapa FPsc
Brara.A03405 2.0kb downstream 2.0kb downstream 3039 true A01: 27992396-27995434 Brassica rapa FPsc
Brara.A03405 2.0kb downstream 2.0kb downstream 2000 false A01: 27993435-27995434 Brassica rapa FPsc
Brara.A03405 5.0kb upstream 5.0kb upstream 6039 true A01: 27987396-27993434 Brassica rapa FPsc
Brara.A03405 5.0kb upstream 5.0kb upstream 5000 false A01: 27987396-27992395 Brassica rapa FPsc
Brara.A03405 5.0kb downstream 5.0kb downstream 6039 true A01: 27992396-27998434 Brassica rapa FPsc
Brara.A03405 5.0kb downstream 5.0kb downstream 5000 false A01: 27993435-27998434 Brassica rapa FPsc
Brara.A03405 10.0kb upstream 10.0kb upstream 11039 true A01: 27982396-27993434 Brassica rapa FPsc
Brara.A03405 10.0kb upstream 10.0kb upstream 10000 false A01: 27982396-27992395 Brassica rapa FPsc
Brara.A03405 10.0kb downstream 10.0kb downstream 11039 true A01: 27992396-28003434 Brassica rapa FPsc
Brara.A03405 10.0kb downstream 10.0kb downstream 10000 false A01: 27993435-28003434 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352398 5261 Brassicaceae Singleton cluster - no MSA
123842500 5264 Brassicales-Malvales View MSA
124323548 5266 SBM View MSA
124169524 5268 Malvidae View MSA
123892463 5270 Rosid View MSA
123743762 5271 Pentapetalae View MSA
122792328 5272 Eudicot View MSA
122043124 5273 Angiosperm View MSA
121347194 5274 Embryophyte View MSA
123426460 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier