Gene : Brara.A03459 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR11527:SF140 - PROTEIN RESTRICTED TEV MOVEMENT 2 Genomic Order:  3459
Name:  ? Brara.A03459 Secondary Identifier:  ? PAC:30638426
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03459 0.5kb upstream 0.5kb upstream 2219 true A01: 28341141-28343359 Brassica rapa FPsc
Brara.A03459 0.5kb upstream 0.5kb upstream 500 false A01: 28342860-28343359 Brassica rapa FPsc
Brara.A03459 0.5kb downstream 0.5kb downstream 2219 true A01: 28340641-28342859 Brassica rapa FPsc
Brara.A03459 0.5kb downstream 0.5kb downstream 500 false A01: 28340641-28341140 Brassica rapa FPsc
Brara.A03459 1.0kb upstream 1.0kb upstream 2719 true A01: 28341141-28343859 Brassica rapa FPsc
Brara.A03459 1.0kb upstream 1.0kb upstream 1000 false A01: 28342860-28343859 Brassica rapa FPsc
Brara.A03459 1.0kb downstream 1.0kb downstream 2719 true A01: 28340141-28342859 Brassica rapa FPsc
Brara.A03459 1.0kb downstream 1.0kb downstream 1000 false A01: 28340141-28341140 Brassica rapa FPsc
Brara.A03459 2.0kb upstream 2.0kb upstream 3719 true A01: 28341141-28344859 Brassica rapa FPsc
Brara.A03459 2.0kb upstream 2.0kb upstream 2000 false A01: 28342860-28344859 Brassica rapa FPsc
Brara.A03459 2.0kb downstream 2.0kb downstream 3719 true A01: 28339141-28342859 Brassica rapa FPsc
Brara.A03459 2.0kb downstream 2.0kb downstream 2000 false A01: 28339141-28341140 Brassica rapa FPsc
Brara.A03459 5.0kb upstream 5.0kb upstream 6719 true A01: 28341141-28347859 Brassica rapa FPsc
Brara.A03459 5.0kb upstream 5.0kb upstream 5000 false A01: 28342860-28347859 Brassica rapa FPsc
Brara.A03459 5.0kb downstream 5.0kb downstream 6719 true A01: 28336141-28342859 Brassica rapa FPsc
Brara.A03459 5.0kb downstream 5.0kb downstream 5000 false A01: 28336141-28341140 Brassica rapa FPsc
Brara.A03459 10.0kb upstream 10.0kb upstream 11719 true A01: 28341141-28352859 Brassica rapa FPsc
Brara.A03459 10.0kb upstream 10.0kb upstream 10000 false A01: 28342860-28352859 Brassica rapa FPsc
Brara.A03459 10.0kb downstream 10.0kb downstream 11719 true A01: 28331141-28342859 Brassica rapa FPsc
Brara.A03459 10.0kb downstream 10.0kb downstream 10000 false A01: 28331141-28341140 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352652 5261 Brassicaceae Singleton cluster - no MSA
123791356 5264 Brassicales-Malvales Singleton cluster - no MSA
124289270 5266 SBM Singleton cluster - no MSA
124250674 5268 Malvidae View MSA
124074314 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier