Gene : Brara.A03460 B. rapa FPsc v1.3
Defline:  (1 of 2) KOG0845 - Nuclear pore complex, Nup98 component (sc Nup145/Nup100/Nup116) Genomic Order:  3460
Name:  ? Brara.A03460 Secondary Identifier:  ? PAC:30637340
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03460 0.5kb upstream 0.5kb upstream 4954 true A01: 28345398-28350351 Brassica rapa FPsc
Brara.A03460 0.5kb upstream 0.5kb upstream 500 false A01: 28345398-28345897 Brassica rapa FPsc
Brara.A03460 0.5kb downstream 0.5kb downstream 4954 true A01: 28345898-28350851 Brassica rapa FPsc
Brara.A03460 0.5kb downstream 0.5kb downstream 500 false A01: 28350352-28350851 Brassica rapa FPsc
Brara.A03460 1.0kb upstream 1.0kb upstream 5454 true A01: 28344898-28350351 Brassica rapa FPsc
Brara.A03460 1.0kb upstream 1.0kb upstream 1000 false A01: 28344898-28345897 Brassica rapa FPsc
Brara.A03460 1.0kb downstream 1.0kb downstream 5454 true A01: 28345898-28351351 Brassica rapa FPsc
Brara.A03460 1.0kb downstream 1.0kb downstream 1000 false A01: 28350352-28351351 Brassica rapa FPsc
Brara.A03460 2.0kb upstream 2.0kb upstream 6454 true A01: 28343898-28350351 Brassica rapa FPsc
Brara.A03460 2.0kb upstream 2.0kb upstream 2000 false A01: 28343898-28345897 Brassica rapa FPsc
Brara.A03460 2.0kb downstream 2.0kb downstream 6454 true A01: 28345898-28352351 Brassica rapa FPsc
Brara.A03460 2.0kb downstream 2.0kb downstream 2000 false A01: 28350352-28352351 Brassica rapa FPsc
Brara.A03460 5.0kb upstream 5.0kb upstream 9454 true A01: 28340898-28350351 Brassica rapa FPsc
Brara.A03460 5.0kb upstream 5.0kb upstream 5000 false A01: 28340898-28345897 Brassica rapa FPsc
Brara.A03460 5.0kb downstream 5.0kb downstream 9454 true A01: 28345898-28355351 Brassica rapa FPsc
Brara.A03460 5.0kb downstream 5.0kb downstream 5000 false A01: 28350352-28355351 Brassica rapa FPsc
Brara.A03460 10.0kb upstream 10.0kb upstream 14454 true A01: 28335898-28350351 Brassica rapa FPsc
Brara.A03460 10.0kb upstream 10.0kb upstream 10000 false A01: 28335898-28345897 Brassica rapa FPsc
Brara.A03460 10.0kb downstream 10.0kb downstream 14454 true A01: 28345898-28360351 Brassica rapa FPsc
Brara.A03460 10.0kb downstream 10.0kb downstream 10000 false A01: 28350352-28360351 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352406 5261 Brassicaceae Singleton cluster - no MSA
123791145 5264 Brassicales-Malvales Singleton cluster - no MSA
124289072 5266 SBM Singleton cluster - no MSA
124251221 5268 Malvidae View MSA
124068519 5270 Rosid View MSA
123739177 5271 Pentapetalae View MSA
122788918 5272 Eudicot View MSA
122044360 5273 Angiosperm View MSA
121349905 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier