Gene : Brara.G02180 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR31065:SF12 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  2180
Name:  ? Brara.G02180 Secondary Identifier:  ? PAC:30635915
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02180 0.5kb upstream 0.5kb upstream 1882 true A07: 19076987-19078868 Brassica rapa FPsc
Brara.G02180 0.5kb upstream 0.5kb upstream 500 false A07: 19078369-19078868 Brassica rapa FPsc
Brara.G02180 0.5kb downstream 0.5kb downstream 1882 true A07: 19076487-19078368 Brassica rapa FPsc
Brara.G02180 0.5kb downstream 0.5kb downstream 500 false A07: 19076487-19076986 Brassica rapa FPsc
Brara.G02180 1.0kb upstream 1.0kb upstream 2382 true A07: 19076987-19079368 Brassica rapa FPsc
Brara.G02180 1.0kb upstream 1.0kb upstream 1000 false A07: 19078369-19079368 Brassica rapa FPsc
Brara.G02180 1.0kb downstream 1.0kb downstream 2382 true A07: 19075987-19078368 Brassica rapa FPsc
Brara.G02180 1.0kb downstream 1.0kb downstream 1000 false A07: 19075987-19076986 Brassica rapa FPsc
Brara.G02180 2.0kb upstream 2.0kb upstream 3382 true A07: 19076987-19080368 Brassica rapa FPsc
Brara.G02180 2.0kb upstream 2.0kb upstream 2000 false A07: 19078369-19080368 Brassica rapa FPsc
Brara.G02180 2.0kb downstream 2.0kb downstream 3382 true A07: 19074987-19078368 Brassica rapa FPsc
Brara.G02180 2.0kb downstream 2.0kb downstream 2000 false A07: 19074987-19076986 Brassica rapa FPsc
Brara.G02180 5.0kb upstream 5.0kb upstream 6382 true A07: 19076987-19083368 Brassica rapa FPsc
Brara.G02180 5.0kb upstream 5.0kb upstream 5000 false A07: 19078369-19083368 Brassica rapa FPsc
Brara.G02180 5.0kb downstream 5.0kb downstream 6382 true A07: 19071987-19078368 Brassica rapa FPsc
Brara.G02180 5.0kb downstream 5.0kb downstream 5000 false A07: 19071987-19076986 Brassica rapa FPsc
Brara.G02180 10.0kb upstream 10.0kb upstream 11382 true A07: 19076987-19088368 Brassica rapa FPsc
Brara.G02180 10.0kb upstream 10.0kb upstream 10000 false A07: 19078369-19088368 Brassica rapa FPsc
Brara.G02180 10.0kb downstream 10.0kb downstream 11382 true A07: 19066987-19078368 Brassica rapa FPsc
Brara.G02180 10.0kb downstream 10.0kb downstream 10000 false A07: 19066987-19076986 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352041 5261 Brassicaceae Singleton cluster - no MSA
123842363 5264 Brassicales-Malvales View MSA
124323432 5266 SBM View MSA
124253177 5268 Malvidae View MSA
124073027 5270 Rosid View MSA
123750243 5271 Pentapetalae View MSA
122790111 5272 Eudicot View MSA
122049805 5273 Angiosperm View MSA
121349108 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier