Gene : Brara.D01725 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR12428:SF19 - INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC Genomic Order:  1725
Name:  ? Brara.D01725 Secondary Identifier:  ? PAC:30620203
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-101 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01725 0.5kb upstream 0.5kb upstream 3335 true A04: 15089871-15093205 Brassica rapa FPsc
Brara.D01725 0.5kb upstream 0.5kb upstream 500 false A04: 15092706-15093205 Brassica rapa FPsc
Brara.D01725 0.5kb downstream 0.5kb downstream 3335 true A04: 15089371-15092705 Brassica rapa FPsc
Brara.D01725 0.5kb downstream 0.5kb downstream 500 false A04: 15089371-15089870 Brassica rapa FPsc
Brara.D01725 1.0kb upstream 1.0kb upstream 3835 true A04: 15089871-15093705 Brassica rapa FPsc
Brara.D01725 1.0kb upstream 1.0kb upstream 1000 false A04: 15092706-15093705 Brassica rapa FPsc
Brara.D01725 1.0kb downstream 1.0kb downstream 3835 true A04: 15088871-15092705 Brassica rapa FPsc
Brara.D01725 1.0kb downstream 1.0kb downstream 1000 false A04: 15088871-15089870 Brassica rapa FPsc
Brara.D01725 2.0kb upstream 2.0kb upstream 4835 true A04: 15089871-15094705 Brassica rapa FPsc
Brara.D01725 2.0kb upstream 2.0kb upstream 2000 false A04: 15092706-15094705 Brassica rapa FPsc
Brara.D01725 2.0kb downstream 2.0kb downstream 4835 true A04: 15087871-15092705 Brassica rapa FPsc
Brara.D01725 2.0kb downstream 2.0kb downstream 2000 false A04: 15087871-15089870 Brassica rapa FPsc
Brara.D01725 5.0kb upstream 5.0kb upstream 7835 true A04: 15089871-15097705 Brassica rapa FPsc
Brara.D01725 5.0kb upstream 5.0kb upstream 5000 false A04: 15092706-15097705 Brassica rapa FPsc
Brara.D01725 5.0kb downstream 5.0kb downstream 7835 true A04: 15084871-15092705 Brassica rapa FPsc
Brara.D01725 5.0kb downstream 5.0kb downstream 5000 false A04: 15084871-15089870 Brassica rapa FPsc
Brara.D01725 10.0kb upstream 10.0kb upstream 12835 true A04: 15089871-15102705 Brassica rapa FPsc
Brara.D01725 10.0kb upstream 10.0kb upstream 10000 false A04: 15092706-15102705 Brassica rapa FPsc
Brara.D01725 10.0kb downstream 10.0kb downstream 12835 true A04: 15079871-15092705 Brassica rapa FPsc
Brara.D01725 10.0kb downstream 10.0kb downstream 10000 false A04: 15079871-15089870 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363892 5261 Brassicaceae View MSA
123832520 5264 Brassicales-Malvales View MSA
124346396 5266 SBM View MSA
124243172 5268 Malvidae View MSA
124062830 5270 Rosid View MSA
123743978 5271 Pentapetalae View MSA
122791056 5272 Eudicot View MSA
122045068 5273 Angiosperm View MSA
121347702 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier