Gene : Brara.G01617 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10516:SF268 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 Genomic Order:  1617
Name:  ? Brara.G01617 Secondary Identifier:  ? PAC:30634485
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01617 0.5kb upstream 0.5kb upstream 4568 true A07: 15877117-15881684 Brassica rapa FPsc
Brara.G01617 0.5kb upstream 0.5kb upstream 500 false A07: 15877117-15877616 Brassica rapa FPsc
Brara.G01617 0.5kb downstream 0.5kb downstream 4568 true A07: 15877617-15882184 Brassica rapa FPsc
Brara.G01617 0.5kb downstream 0.5kb downstream 500 false A07: 15881685-15882184 Brassica rapa FPsc
Brara.G01617 1.0kb upstream 1.0kb upstream 5068 true A07: 15876617-15881684 Brassica rapa FPsc
Brara.G01617 1.0kb upstream 1.0kb upstream 1000 false A07: 15876617-15877616 Brassica rapa FPsc
Brara.G01617 1.0kb downstream 1.0kb downstream 5068 true A07: 15877617-15882684 Brassica rapa FPsc
Brara.G01617 1.0kb downstream 1.0kb downstream 1000 false A07: 15881685-15882684 Brassica rapa FPsc
Brara.G01617 2.0kb upstream 2.0kb upstream 6068 true A07: 15875617-15881684 Brassica rapa FPsc
Brara.G01617 2.0kb upstream 2.0kb upstream 2000 false A07: 15875617-15877616 Brassica rapa FPsc
Brara.G01617 2.0kb downstream 2.0kb downstream 6068 true A07: 15877617-15883684 Brassica rapa FPsc
Brara.G01617 2.0kb downstream 2.0kb downstream 2000 false A07: 15881685-15883684 Brassica rapa FPsc
Brara.G01617 5.0kb upstream 5.0kb upstream 9068 true A07: 15872617-15881684 Brassica rapa FPsc
Brara.G01617 5.0kb upstream 5.0kb upstream 5000 false A07: 15872617-15877616 Brassica rapa FPsc
Brara.G01617 5.0kb downstream 5.0kb downstream 9068 true A07: 15877617-15886684 Brassica rapa FPsc
Brara.G01617 5.0kb downstream 5.0kb downstream 5000 false A07: 15881685-15886684 Brassica rapa FPsc
Brara.G01617 10.0kb upstream 10.0kb upstream 14068 true A07: 15867617-15881684 Brassica rapa FPsc
Brara.G01617 10.0kb upstream 10.0kb upstream 10000 false A07: 15867617-15877616 Brassica rapa FPsc
Brara.G01617 10.0kb downstream 10.0kb downstream 14068 true A07: 15877617-15891684 Brassica rapa FPsc
Brara.G01617 10.0kb downstream 10.0kb downstream 10000 false A07: 15881685-15891684 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351685 5261 Brassicaceae Singleton cluster - no MSA
123790536 5264 Brassicales-Malvales Singleton cluster - no MSA
124288484 5266 SBM Singleton cluster - no MSA
124250608 5268 Malvidae View MSA
124061046 5270 Rosid View MSA
123741397 5271 Pentapetalae View MSA
122792989 5272 Eudicot View MSA
122041915 5273 Angiosperm View MSA
121346304 5274 Embryophyte View MSA
123424056 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier