Gene : Brara.D01729 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR24128:SF14 - E3 UBIQUITIN-PROTEIN LIGASE XBAT31-RELATED Genomic Order:  1729
Name:  ? Brara.D01729 Secondary Identifier:  ? PAC:30621396
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D01729 0.5kb upstream 0.5kb upstream 2592 true A04: 15123353-15125944 Brassica rapa FPsc
Brara.D01729 0.5kb upstream 0.5kb upstream 500 false A04: 15123353-15123852 Brassica rapa FPsc
Brara.D01729 0.5kb downstream 0.5kb downstream 2592 true A04: 15123853-15126444 Brassica rapa FPsc
Brara.D01729 0.5kb downstream 0.5kb downstream 500 false A04: 15125945-15126444 Brassica rapa FPsc
Brara.D01729 1.0kb upstream 1.0kb upstream 3092 true A04: 15122853-15125944 Brassica rapa FPsc
Brara.D01729 1.0kb upstream 1.0kb upstream 1000 false A04: 15122853-15123852 Brassica rapa FPsc
Brara.D01729 1.0kb downstream 1.0kb downstream 3092 true A04: 15123853-15126944 Brassica rapa FPsc
Brara.D01729 1.0kb downstream 1.0kb downstream 1000 false A04: 15125945-15126944 Brassica rapa FPsc
Brara.D01729 2.0kb upstream 2.0kb upstream 4092 true A04: 15121853-15125944 Brassica rapa FPsc
Brara.D01729 2.0kb upstream 2.0kb upstream 2000 false A04: 15121853-15123852 Brassica rapa FPsc
Brara.D01729 2.0kb downstream 2.0kb downstream 4092 true A04: 15123853-15127944 Brassica rapa FPsc
Brara.D01729 2.0kb downstream 2.0kb downstream 2000 false A04: 15125945-15127944 Brassica rapa FPsc
Brara.D01729 5.0kb upstream 5.0kb upstream 7092 true A04: 15118853-15125944 Brassica rapa FPsc
Brara.D01729 5.0kb upstream 5.0kb upstream 5000 false A04: 15118853-15123852 Brassica rapa FPsc
Brara.D01729 5.0kb downstream 5.0kb downstream 7092 true A04: 15123853-15130944 Brassica rapa FPsc
Brara.D01729 5.0kb downstream 5.0kb downstream 5000 false A04: 15125945-15130944 Brassica rapa FPsc
Brara.D01729 10.0kb upstream 10.0kb upstream 12092 true A04: 15113853-15125944 Brassica rapa FPsc
Brara.D01729 10.0kb upstream 10.0kb upstream 10000 false A04: 15113853-15123852 Brassica rapa FPsc
Brara.D01729 10.0kb downstream 10.0kb downstream 12092 true A04: 15123853-15135944 Brassica rapa FPsc
Brara.D01729 10.0kb downstream 10.0kb downstream 10000 false A04: 15125945-15135944 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348609 5261 Brassicaceae Singleton cluster - no MSA
123787925 5264 Brassicales-Malvales Singleton cluster - no MSA
124285977 5266 SBM Singleton cluster - no MSA
124139934 5268 Malvidae Singleton cluster - no MSA
123867236 5270 Rosid Singleton cluster - no MSA
123746800 5271 Pentapetalae View MSA
122791790 5272 Eudicot View MSA
122045782 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121344984 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier