Gene : Brara.A03108 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR18896:SF11 - PHOSPHOLIPASE D ALPHA 1-RELATED Genomic Order:  3108
Name:  ? Brara.A03108 Secondary Identifier:  ? PAC:30639141
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPASYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7039 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03108 0.5kb upstream 0.5kb upstream 4278 true A01: 26234628-26238905 Brassica rapa FPsc
Brara.A03108 0.5kb upstream 0.5kb upstream 500 false A01: 26238406-26238905 Brassica rapa FPsc
Brara.A03108 0.5kb downstream 0.5kb downstream 4278 true A01: 26234128-26238405 Brassica rapa FPsc
Brara.A03108 0.5kb downstream 0.5kb downstream 500 false A01: 26234128-26234627 Brassica rapa FPsc
Brara.A03108 1.0kb upstream 1.0kb upstream 4778 true A01: 26234628-26239405 Brassica rapa FPsc
Brara.A03108 1.0kb upstream 1.0kb upstream 1000 false A01: 26238406-26239405 Brassica rapa FPsc
Brara.A03108 1.0kb downstream 1.0kb downstream 4778 true A01: 26233628-26238405 Brassica rapa FPsc
Brara.A03108 1.0kb downstream 1.0kb downstream 1000 false A01: 26233628-26234627 Brassica rapa FPsc
Brara.A03108 2.0kb upstream 2.0kb upstream 5778 true A01: 26234628-26240405 Brassica rapa FPsc
Brara.A03108 2.0kb upstream 2.0kb upstream 2000 false A01: 26238406-26240405 Brassica rapa FPsc
Brara.A03108 2.0kb downstream 2.0kb downstream 5778 true A01: 26232628-26238405 Brassica rapa FPsc
Brara.A03108 2.0kb downstream 2.0kb downstream 2000 false A01: 26232628-26234627 Brassica rapa FPsc
Brara.A03108 5.0kb upstream 5.0kb upstream 8778 true A01: 26234628-26243405 Brassica rapa FPsc
Brara.A03108 5.0kb upstream 5.0kb upstream 5000 false A01: 26238406-26243405 Brassica rapa FPsc
Brara.A03108 5.0kb downstream 5.0kb downstream 8778 true A01: 26229628-26238405 Brassica rapa FPsc
Brara.A03108 5.0kb downstream 5.0kb downstream 5000 false A01: 26229628-26234627 Brassica rapa FPsc
Brara.A03108 10.0kb upstream 10.0kb upstream 13778 true A01: 26234628-26248405 Brassica rapa FPsc
Brara.A03108 10.0kb upstream 10.0kb upstream 10000 false A01: 26238406-26248405 Brassica rapa FPsc
Brara.A03108 10.0kb downstream 10.0kb downstream 13778 true A01: 26224628-26238405 Brassica rapa FPsc
Brara.A03108 10.0kb downstream 10.0kb downstream 10000 false A01: 26224628-26234627 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352839 5261 Brassicaceae Singleton cluster - no MSA
123842241 5264 Brassicales-Malvales View MSA
124323344 5266 SBM View MSA
124251763 5268 Malvidae View MSA
124060691 5270 Rosid View MSA
123737706 5271 Pentapetalae View MSA
122793552 5272 Eudicot View MSA
122046081 5273 Angiosperm View MSA
121348211 5274 Embryophyte View MSA
123428505 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier