Gene : Brara.A03879 B. rapa FPsc v1.3
Defline:  (1 of 3) 5.3.1.8 - Mannose-6-phosphate isomerase / Phosphomannose isomerase Genomic Order:  3879
Name:  ? Brara.A03879 Secondary Identifier:  ? PAC:30638779
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc MANNCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3881 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5659 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-882 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03879 0.5kb upstream 0.5kb upstream 2844 true A01: 30599254-30602097 Brassica rapa FPsc
Brara.A03879 0.5kb upstream 0.5kb upstream 500 false A01: 30599254-30599753 Brassica rapa FPsc
Brara.A03879 0.5kb downstream 0.5kb downstream 2844 true A01: 30599754-30602597 Brassica rapa FPsc
Brara.A03879 0.5kb downstream 0.5kb downstream 500 false A01: 30602098-30602597 Brassica rapa FPsc
Brara.A03879 1.0kb upstream 1.0kb upstream 3344 true A01: 30598754-30602097 Brassica rapa FPsc
Brara.A03879 1.0kb upstream 1.0kb upstream 1000 false A01: 30598754-30599753 Brassica rapa FPsc
Brara.A03879 1.0kb downstream 1.0kb downstream 3344 true A01: 30599754-30603097 Brassica rapa FPsc
Brara.A03879 1.0kb downstream 1.0kb downstream 1000 false A01: 30602098-30603097 Brassica rapa FPsc
Brara.A03879 2.0kb upstream 2.0kb upstream 4344 true A01: 30597754-30602097 Brassica rapa FPsc
Brara.A03879 2.0kb upstream 2.0kb upstream 2000 false A01: 30597754-30599753 Brassica rapa FPsc
Brara.A03879 2.0kb downstream 2.0kb downstream 4344 true A01: 30599754-30604097 Brassica rapa FPsc
Brara.A03879 2.0kb downstream 2.0kb downstream 2000 false A01: 30602098-30604097 Brassica rapa FPsc
Brara.A03879 5.0kb upstream 5.0kb upstream 7344 true A01: 30594754-30602097 Brassica rapa FPsc
Brara.A03879 5.0kb upstream 5.0kb upstream 5000 false A01: 30594754-30599753 Brassica rapa FPsc
Brara.A03879 5.0kb downstream 5.0kb downstream 7344 true A01: 30599754-30607097 Brassica rapa FPsc
Brara.A03879 5.0kb downstream 5.0kb downstream 5000 false A01: 30602098-30607097 Brassica rapa FPsc
Brara.A03879 10.0kb upstream 10.0kb upstream 12344 true A01: 30589754-30602097 Brassica rapa FPsc
Brara.A03879 10.0kb upstream 10.0kb upstream 10000 false A01: 30589754-30599753 Brassica rapa FPsc
Brara.A03879 10.0kb downstream 10.0kb downstream 12344 true A01: 30599754-30612097 Brassica rapa FPsc
Brara.A03879 10.0kb downstream 10.0kb downstream 10000 false A01: 30602098-30612097 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352746 5261 Brassicaceae Singleton cluster - no MSA
123791434 5264 Brassicales-Malvales Singleton cluster - no MSA
124289348 5266 SBM Singleton cluster - no MSA
124142701 5268 Malvidae Singleton cluster - no MSA
124075221 5270 Rosid View MSA
123747047 5271 Pentapetalae View MSA
122796882 5272 Eudicot View MSA
122046941 5273 Angiosperm View MSA
121350841 5274 Embryophyte View MSA
123423837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier