Gene : Brara.A03905 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31235:SF17 - PEROXIDASE 27-RELATED Genomic Order:  3905
Name:  ? Brara.A03905 Secondary Identifier:  ? PAC:30638792
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5466 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7214 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7445 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03905 0.5kb upstream 0.5kb upstream 5120 true A01: 30733340-30738459 Brassica rapa FPsc
Brara.A03905 0.5kb upstream 0.5kb upstream 500 false A01: 30733340-30733839 Brassica rapa FPsc
Brara.A03905 0.5kb downstream 0.5kb downstream 5120 true A01: 30733840-30738959 Brassica rapa FPsc
Brara.A03905 0.5kb downstream 0.5kb downstream 500 false A01: 30738460-30738959 Brassica rapa FPsc
Brara.A03905 1.0kb upstream 1.0kb upstream 5620 true A01: 30732840-30738459 Brassica rapa FPsc
Brara.A03905 1.0kb upstream 1.0kb upstream 1000 false A01: 30732840-30733839 Brassica rapa FPsc
Brara.A03905 1.0kb downstream 1.0kb downstream 5620 true A01: 30733840-30739459 Brassica rapa FPsc
Brara.A03905 1.0kb downstream 1.0kb downstream 1000 false A01: 30738460-30739459 Brassica rapa FPsc
Brara.A03905 2.0kb upstream 2.0kb upstream 6620 true A01: 30731840-30738459 Brassica rapa FPsc
Brara.A03905 2.0kb upstream 2.0kb upstream 2000 false A01: 30731840-30733839 Brassica rapa FPsc
Brara.A03905 2.0kb downstream 2.0kb downstream 6620 true A01: 30733840-30740459 Brassica rapa FPsc
Brara.A03905 2.0kb downstream 2.0kb downstream 2000 false A01: 30738460-30740459 Brassica rapa FPsc
Brara.A03905 5.0kb upstream 5.0kb upstream 9620 true A01: 30728840-30738459 Brassica rapa FPsc
Brara.A03905 5.0kb upstream 5.0kb upstream 5000 false A01: 30728840-30733839 Brassica rapa FPsc
Brara.A03905 5.0kb downstream 5.0kb downstream 9620 true A01: 30733840-30743459 Brassica rapa FPsc
Brara.A03905 5.0kb downstream 5.0kb downstream 5000 false A01: 30738460-30743459 Brassica rapa FPsc
Brara.A03905 10.0kb upstream 10.0kb upstream 14620 true A01: 30723840-30738459 Brassica rapa FPsc
Brara.A03905 10.0kb upstream 10.0kb upstream 10000 false A01: 30723840-30733839 Brassica rapa FPsc
Brara.A03905 10.0kb downstream 10.0kb downstream 14620 true A01: 30733840-30748459 Brassica rapa FPsc
Brara.A03905 10.0kb downstream 10.0kb downstream 10000 false A01: 30738460-30748459 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371938 5261 Brassicaceae View MSA
123841316 5264 Brassicales-Malvales View MSA
124340691 5266 SBM View MSA
124241136 5268 Malvidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier