Gene : Brara.A03894 B. rapa FPsc v1.3
Defline:  (1 of 3) 1.1.1.44 - Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) / Phosphogluconic acid dehydrogenase Genomic Order:  3894
Name:  ? Brara.A03894 Secondary Identifier:  ? PAC:30638540
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc OXIDATIVEPENT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PENTOSE-P-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03894 0.5kb upstream 0.5kb upstream 3328 true A01: 30675218-30678545 Brassica rapa FPsc
Brara.A03894 0.5kb upstream 0.5kb upstream 500 false A01: 30675218-30675717 Brassica rapa FPsc
Brara.A03894 0.5kb downstream 0.5kb downstream 3328 true A01: 30675718-30679045 Brassica rapa FPsc
Brara.A03894 0.5kb downstream 0.5kb downstream 500 false A01: 30678546-30679045 Brassica rapa FPsc
Brara.A03894 1.0kb upstream 1.0kb upstream 3828 true A01: 30674718-30678545 Brassica rapa FPsc
Brara.A03894 1.0kb upstream 1.0kb upstream 1000 false A01: 30674718-30675717 Brassica rapa FPsc
Brara.A03894 1.0kb downstream 1.0kb downstream 3828 true A01: 30675718-30679545 Brassica rapa FPsc
Brara.A03894 1.0kb downstream 1.0kb downstream 1000 false A01: 30678546-30679545 Brassica rapa FPsc
Brara.A03894 2.0kb upstream 2.0kb upstream 4828 true A01: 30673718-30678545 Brassica rapa FPsc
Brara.A03894 2.0kb upstream 2.0kb upstream 2000 false A01: 30673718-30675717 Brassica rapa FPsc
Brara.A03894 2.0kb downstream 2.0kb downstream 4828 true A01: 30675718-30680545 Brassica rapa FPsc
Brara.A03894 2.0kb downstream 2.0kb downstream 2000 false A01: 30678546-30680545 Brassica rapa FPsc
Brara.A03894 5.0kb upstream 5.0kb upstream 7828 true A01: 30670718-30678545 Brassica rapa FPsc
Brara.A03894 5.0kb upstream 5.0kb upstream 5000 false A01: 30670718-30675717 Brassica rapa FPsc
Brara.A03894 5.0kb downstream 5.0kb downstream 7828 true A01: 30675718-30683545 Brassica rapa FPsc
Brara.A03894 5.0kb downstream 5.0kb downstream 5000 false A01: 30678546-30683545 Brassica rapa FPsc
Brara.A03894 10.0kb upstream 10.0kb upstream 12828 true A01: 30665718-30678545 Brassica rapa FPsc
Brara.A03894 10.0kb upstream 10.0kb upstream 10000 false A01: 30665718-30675717 Brassica rapa FPsc
Brara.A03894 10.0kb downstream 10.0kb downstream 12828 true A01: 30675718-30688545 Brassica rapa FPsc
Brara.A03894 10.0kb downstream 10.0kb downstream 10000 false A01: 30678546-30688545 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367154 5261 Brassicaceae View MSA
123835743 5264 Brassicales-Malvales View MSA
124350427 5266 SBM View MSA
124251436 5268 Malvidae View MSA
124067916 5270 Rosid View MSA
123746005 5271 Pentapetalae View MSA
122793535 5272 Eudicot View MSA
122047871 5273 Angiosperm View MSA
121351017 5274 Embryophyte View MSA
123424238 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier