Gene : Brara.A03934 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR23315:SF64 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  3934
Name:  ? Brara.A03934 Secondary Identifier:  ? PAC:30638476
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03934 0.5kb upstream 0.5kb upstream 1535 true A01: 30866918-30868452 Brassica rapa FPsc
Brara.A03934 0.5kb upstream 0.5kb upstream 500 false A01: 30866918-30867417 Brassica rapa FPsc
Brara.A03934 0.5kb downstream 0.5kb downstream 1535 true A01: 30867418-30868952 Brassica rapa FPsc
Brara.A03934 0.5kb downstream 0.5kb downstream 500 false A01: 30868453-30868952 Brassica rapa FPsc
Brara.A03934 1.0kb upstream 1.0kb upstream 2035 true A01: 30866418-30868452 Brassica rapa FPsc
Brara.A03934 1.0kb upstream 1.0kb upstream 1000 false A01: 30866418-30867417 Brassica rapa FPsc
Brara.A03934 1.0kb downstream 1.0kb downstream 2035 true A01: 30867418-30869452 Brassica rapa FPsc
Brara.A03934 1.0kb downstream 1.0kb downstream 1000 false A01: 30868453-30869452 Brassica rapa FPsc
Brara.A03934 2.0kb upstream 2.0kb upstream 3035 true A01: 30865418-30868452 Brassica rapa FPsc
Brara.A03934 2.0kb upstream 2.0kb upstream 2000 false A01: 30865418-30867417 Brassica rapa FPsc
Brara.A03934 2.0kb downstream 2.0kb downstream 3035 true A01: 30867418-30870452 Brassica rapa FPsc
Brara.A03934 2.0kb downstream 2.0kb downstream 2000 false A01: 30868453-30870452 Brassica rapa FPsc
Brara.A03934 5.0kb upstream 5.0kb upstream 6035 true A01: 30862418-30868452 Brassica rapa FPsc
Brara.A03934 5.0kb upstream 5.0kb upstream 5000 false A01: 30862418-30867417 Brassica rapa FPsc
Brara.A03934 5.0kb downstream 5.0kb downstream 6035 true A01: 30867418-30873452 Brassica rapa FPsc
Brara.A03934 5.0kb downstream 5.0kb downstream 5000 false A01: 30868453-30873452 Brassica rapa FPsc
Brara.A03934 10.0kb upstream 10.0kb upstream 11035 true A01: 30857418-30868452 Brassica rapa FPsc
Brara.A03934 10.0kb upstream 10.0kb upstream 10000 false A01: 30857418-30867417 Brassica rapa FPsc
Brara.A03934 10.0kb downstream 10.0kb downstream 11035 true A01: 30867418-30878452 Brassica rapa FPsc
Brara.A03934 10.0kb downstream 10.0kb downstream 10000 false A01: 30868453-30878452 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367650 5261 Brassicaceae View MSA
123834483 5264 Brassicales-Malvales View MSA
124342397 5266 SBM View MSA
124251094 5268 Malvidae View MSA
124062605 5270 Rosid View MSA
123738053 5271 Pentapetalae View MSA
122796694 5272 Eudicot View MSA
122047574 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier