Gene : Brara.D02169 B. rapa FPsc v1.3
Defline:  (1 of 7) 3.1.3.24 - Sucrose-phosphate phosphatase / Sucrose-6-phosphate phosphatase Genomic Order:  2169
Name:  ? Brara.D02169 Secondary Identifier:  ? PAC:30620890
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7238 Brassica rapa FPsc pathologic  
BrapaFPsc SUCSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D02169 0.5kb upstream 0.5kb upstream 3090 true A04: 17649948-17653037 Brassica rapa FPsc
Brara.D02169 0.5kb upstream 0.5kb upstream 500 false A04: 17649948-17650447 Brassica rapa FPsc
Brara.D02169 0.5kb downstream 0.5kb downstream 3090 true A04: 17650448-17653537 Brassica rapa FPsc
Brara.D02169 0.5kb downstream 0.5kb downstream 500 false A04: 17653038-17653537 Brassica rapa FPsc
Brara.D02169 1.0kb upstream 1.0kb upstream 3590 true A04: 17649448-17653037 Brassica rapa FPsc
Brara.D02169 1.0kb upstream 1.0kb upstream 1000 false A04: 17649448-17650447 Brassica rapa FPsc
Brara.D02169 1.0kb downstream 1.0kb downstream 3590 true A04: 17650448-17654037 Brassica rapa FPsc
Brara.D02169 1.0kb downstream 1.0kb downstream 1000 false A04: 17653038-17654037 Brassica rapa FPsc
Brara.D02169 2.0kb upstream 2.0kb upstream 4590 true A04: 17648448-17653037 Brassica rapa FPsc
Brara.D02169 2.0kb upstream 2.0kb upstream 2000 false A04: 17648448-17650447 Brassica rapa FPsc
Brara.D02169 2.0kb downstream 2.0kb downstream 4590 true A04: 17650448-17655037 Brassica rapa FPsc
Brara.D02169 2.0kb downstream 2.0kb downstream 2000 false A04: 17653038-17655037 Brassica rapa FPsc
Brara.D02169 5.0kb upstream 5.0kb upstream 7590 true A04: 17645448-17653037 Brassica rapa FPsc
Brara.D02169 5.0kb upstream 5.0kb upstream 5000 false A04: 17645448-17650447 Brassica rapa FPsc
Brara.D02169 5.0kb downstream 5.0kb downstream 7590 true A04: 17650448-17658037 Brassica rapa FPsc
Brara.D02169 5.0kb downstream 5.0kb downstream 5000 false A04: 17653038-17658037 Brassica rapa FPsc
Brara.D02169 10.0kb upstream 10.0kb upstream 12590 true A04: 17640448-17653037 Brassica rapa FPsc
Brara.D02169 10.0kb upstream 10.0kb upstream 10000 false A04: 17640448-17650447 Brassica rapa FPsc
Brara.D02169 10.0kb downstream 10.0kb downstream 12590 true A04: 17650448-17663037 Brassica rapa FPsc
Brara.D02169 10.0kb downstream 10.0kb downstream 10000 false A04: 17653038-17663037 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363524 5261 Brassicaceae View MSA
123834610 5264 Brassicales-Malvales View MSA
124339370 5266 SBM View MSA
124250710 5268 Malvidae View MSA
124067868 5270 Rosid View MSA
123748054 5271 Pentapetalae View MSA
122788536 5272 Eudicot View MSA
122041652 5273 Angiosperm View MSA
123428930 5275 Viridiplantae View MSA
121349182 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier