Gene : Brara.D02195 B. rapa FPsc v1.3
Defline:  (1 of 10) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  2195
Name:  ? Brara.D02195 Secondary Identifier:  ? PAC:30620943
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D02195 0.5kb upstream 0.5kb upstream 1745 true A04: 17822178-17823922 Brassica rapa FPsc
Brara.D02195 0.5kb upstream 0.5kb upstream 500 false A04: 17823423-17823922 Brassica rapa FPsc
Brara.D02195 0.5kb downstream 0.5kb downstream 1745 true A04: 17821678-17823422 Brassica rapa FPsc
Brara.D02195 0.5kb downstream 0.5kb downstream 500 false A04: 17821678-17822177 Brassica rapa FPsc
Brara.D02195 1.0kb upstream 1.0kb upstream 2245 true A04: 17822178-17824422 Brassica rapa FPsc
Brara.D02195 1.0kb upstream 1.0kb upstream 1000 false A04: 17823423-17824422 Brassica rapa FPsc
Brara.D02195 1.0kb downstream 1.0kb downstream 2245 true A04: 17821178-17823422 Brassica rapa FPsc
Brara.D02195 1.0kb downstream 1.0kb downstream 1000 false A04: 17821178-17822177 Brassica rapa FPsc
Brara.D02195 2.0kb upstream 2.0kb upstream 3245 true A04: 17822178-17825422 Brassica rapa FPsc
Brara.D02195 2.0kb upstream 2.0kb upstream 2000 false A04: 17823423-17825422 Brassica rapa FPsc
Brara.D02195 2.0kb downstream 2.0kb downstream 3245 true A04: 17820178-17823422 Brassica rapa FPsc
Brara.D02195 2.0kb downstream 2.0kb downstream 2000 false A04: 17820178-17822177 Brassica rapa FPsc
Brara.D02195 5.0kb upstream 5.0kb upstream 6245 true A04: 17822178-17828422 Brassica rapa FPsc
Brara.D02195 5.0kb upstream 5.0kb upstream 5000 false A04: 17823423-17828422 Brassica rapa FPsc
Brara.D02195 5.0kb downstream 5.0kb downstream 6245 true A04: 17817178-17823422 Brassica rapa FPsc
Brara.D02195 5.0kb downstream 5.0kb downstream 5000 false A04: 17817178-17822177 Brassica rapa FPsc
Brara.D02195 10.0kb upstream 10.0kb upstream 11245 true A04: 17822178-17833422 Brassica rapa FPsc
Brara.D02195 10.0kb upstream 10.0kb upstream 10000 false A04: 17823423-17833422 Brassica rapa FPsc
Brara.D02195 10.0kb downstream 10.0kb downstream 11245 true A04: 17812178-17823422 Brassica rapa FPsc
Brara.D02195 10.0kb downstream 10.0kb downstream 10000 false A04: 17812178-17822177 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360171 5261 Brassicaceae View MSA
123797902 5264 Brassicales-Malvales View MSA
124295601 5266 SBM View MSA
124147993 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier