Gene : Brara.A03823 B. rapa FPsc v1.3
Defline:  (1 of 2) 3.1.4.3 - Phospholipase C / Lipophosphodiesterase I Genomic Order:  3823
Name:  ? Brara.A03823 Secondary Identifier:  ? PAC:30639776
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPASYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03823 0.5kb upstream 0.5kb upstream 2761 true A01: 30313084-30315844 Brassica rapa FPsc
Brara.A03823 0.5kb upstream 0.5kb upstream 500 false A01: 30313084-30313583 Brassica rapa FPsc
Brara.A03823 0.5kb downstream 0.5kb downstream 2761 true A01: 30313584-30316344 Brassica rapa FPsc
Brara.A03823 0.5kb downstream 0.5kb downstream 500 false A01: 30315845-30316344 Brassica rapa FPsc
Brara.A03823 1.0kb upstream 1.0kb upstream 3261 true A01: 30312584-30315844 Brassica rapa FPsc
Brara.A03823 1.0kb upstream 1.0kb upstream 1000 false A01: 30312584-30313583 Brassica rapa FPsc
Brara.A03823 1.0kb downstream 1.0kb downstream 3261 true A01: 30313584-30316844 Brassica rapa FPsc
Brara.A03823 1.0kb downstream 1.0kb downstream 1000 false A01: 30315845-30316844 Brassica rapa FPsc
Brara.A03823 2.0kb upstream 2.0kb upstream 4261 true A01: 30311584-30315844 Brassica rapa FPsc
Brara.A03823 2.0kb upstream 2.0kb upstream 2000 false A01: 30311584-30313583 Brassica rapa FPsc
Brara.A03823 2.0kb downstream 2.0kb downstream 4261 true A01: 30313584-30317844 Brassica rapa FPsc
Brara.A03823 2.0kb downstream 2.0kb downstream 2000 false A01: 30315845-30317844 Brassica rapa FPsc
Brara.A03823 5.0kb upstream 5.0kb upstream 7261 true A01: 30308584-30315844 Brassica rapa FPsc
Brara.A03823 5.0kb upstream 5.0kb upstream 5000 false A01: 30308584-30313583 Brassica rapa FPsc
Brara.A03823 5.0kb downstream 5.0kb downstream 7261 true A01: 30313584-30320844 Brassica rapa FPsc
Brara.A03823 5.0kb downstream 5.0kb downstream 5000 false A01: 30315845-30320844 Brassica rapa FPsc
Brara.A03823 10.0kb upstream 10.0kb upstream 12261 true A01: 30303584-30315844 Brassica rapa FPsc
Brara.A03823 10.0kb upstream 10.0kb upstream 10000 false A01: 30303584-30313583 Brassica rapa FPsc
Brara.A03823 10.0kb downstream 10.0kb downstream 12261 true A01: 30313584-30325844 Brassica rapa FPsc
Brara.A03823 10.0kb downstream 10.0kb downstream 10000 false A01: 30315845-30325844 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365377 5261 Brassicaceae View MSA
123831528 5264 Brassicales-Malvales View MSA
124345260 5266 SBM View MSA
124244843 5268 Malvidae View MSA
124067828 5270 Rosid View MSA
123747461 5271 Pentapetalae View MSA
122786129 5272 Eudicot View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier